RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 RFPL3SP0C7P2 107 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 PRPS2P11908 318 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 BMP5P22003 454 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 MAPK3P27361 379 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 SRD5A2P31213 254 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 GABARAPL2P60520 117 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 RAB14P61106 215 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 SNRPD2P62316 118 aaKnown RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 LGALS3BPQ08380 585 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 CD47Q08722 323 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 SCRN3Q0VDG4 424 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ZMYND11Q15326 602 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 LCN8Q6JVE9 175 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ERICH5Q6P6B1 374 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 C16orf47Q6ZP98 133 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 P2RY8Q86VZ1 359 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ZFAND1Q8TCF1 268 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 LGALS12Q96DT0 336 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 USB1Q9BQ65 265 aaKnown RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 BCL7BQ9BQE9 202 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 CNPPD1Q9BV87 410 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 RBM24Q9BX46 236 aaKnown RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 OR10A5Q9H207 317 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 BRF2Q9HAW0 419 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 C14orf119Q9NWQ9 140 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 C1orf109Q9NX04 203 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ASIC5Q9NY37 505 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ZNF226Q9NYT6 803 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 TBC1D24Q9ULP9 559 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 DIMT1Q9UNQ2 313 aaKnown RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 C19orf53Q9UNZ5 99 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 CAMK2AQ9UQM7 478 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 PLEKHA6Q9Y2H5 1048 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 HMX3A6NHT5 357 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 OR6C70A6NIJ9 312 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 G3V3Y1 287 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 UPK1AO00322 258 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 SLC1A7O00341 560 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 NR5A2O00482 541 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 FRS3O43559 492 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 XPNPEP2O43895 674 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ZNF354AO60765 605 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 TGFB1P01137 390 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ATP1B1P05026 303 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 NCK1P16333 377 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 CSNK2A2P19784 350 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 DDCP20711 480 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 PPICP45877 212 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 RFX2P48378 723 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 GSK3AP49840 483 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 FOXA1P55317 472 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 RPS13P62277 151 aaKnown RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 LTBQ06643 244 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 EPS8Q12929 822 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 DGCR6Q14129 220 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 GANABQ14697 944 aaKnown RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 CYP51A1Q16850 503 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 SPATS1Q496A3 300 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 FRG2Q64ET8 278 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 SSX8Q7RTT4 187 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 TRIM46Q7Z4K8 759 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 C8orf59Q8N0T1 100 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ZNF675Q8TD23 568 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 RNF138Q8WVD3 245 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 DEDD2Q8WXF8 326 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 SLC7A6Q92536 515 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 HGDQ93099 445 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 FBXW5Q969U6 566 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 LCORQ96JN0 433 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 FRG2BQ96QU4 278 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 GAL3ST4Q96RP7 486 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 MBOAT4Q96T53 435 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 FAIM2Q9BWQ8 316 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ACPTQ9BZG2 426 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 AMBRA1Q9C0C7 1298 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 C6orf62Q9GZU0 229 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 TNFRSF12AQ9NP84 129 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 DIABLOQ9NR28 239 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 SDR39U1Q9NRG7 319 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 CMTM6Q9NX76 183 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ALKBH4Q9NXW9 302 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 CLCF1Q9UBD9 225 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 NUFIP1Q9UHK0 495 aaKnown RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 LEF1Q9UJU2 399 aaPredicted RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 EXO1Q9UQ84 846 aaKnown RBP5.44□□□□□ -1.54
PTPRR-204ENST00000440835 ZNF175Q9Y473 711 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 V9GYQ6 96 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 DOCK7Q96N67 2140 aa5.44□□□□□ -1.54
PTPRR-204ENST00000440835 CIB4A0PJX0 185 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 FRG2CA6NGY1 282 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 PPP6CO00743 305 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 CIDEAO60543 219 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 SMPD2O60906 423 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 SEC22BO75396 215 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 SLC22A3O75751 556 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 TRAPPC6AO75865 159 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 PLATP00750 562 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 ALPLP05186 524 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 THRBP10828 461 aa5.43□□□□□ -1.54
PTPRR-204ENST00000440835 PEPDP12955 493 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms