RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZNF671Q8TAW3 534 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 SMAP2Q8WU79 429 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 ZDHHC12Q96GR4 267 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 OR1F2PQ96R84 312 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ABHD1Q96SE0 405 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ORAI3Q9BRQ5 295 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 LAT2Q9GZY6 243 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 SLITRK2Q9H156 845 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 PCED1AQ9H1Q7 454 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 BRD7Q9NPI1 651 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ZNF281Q9Y2X9 895 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ADAM18Q9Y3Q7 739 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 F5P12259 2224 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 CACNA1IQ9P0X4 2223 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 TMEM131Q92545 1883 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 IGHV1OR15-9A0A0B4J2B8 117 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 TEX13CA0A0J9YWL9 993 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 OR6C68A6NDL8 312 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 SHISA7A6NL88 538 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 HSPB2A8KAH6 182 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 LANCL1O43813 399 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 SELENOFO60613 162 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 ZNF432O94892 652 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 UTS2O95399 124 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 PAHP00439 452 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 HIST1H2ABP04908 130 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
CD44-210ENST00000434472 ATF1P18846 271 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 MAPK3P27361 379 aaPredicted RBP9.52□□□□□ -0.89
CD44-210ENST00000434472 CD38P28907 300 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 SDHAP31040 664 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 RPS11P62280 158 aaKnown RBP eCLIP9.52□□□□□ -0.89
CD44-210ENST00000434472 RPL6Q02878 288 aaKnown RBP9.52□□□□□ -0.89
CD44-210ENST00000434472 SKP2Q13309 424 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 DYRK1AQ13627 763 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 ANGPT1Q15389 498 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 HSPB2Q16082 182 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 NNATQ16517 81 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 ALG10Q5BKT4 473 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 SLC22A10Q63ZE4 541 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 GPR139Q6DWJ6 353 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 HIST3H2AQ7L7L0 130 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 TMEM151BQ8IW70 566 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 GHDCQ8N2G8 530 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 RFLNBQ8N5W9 214 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 EID2Q8N6I1 236 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 LRRC75AQ8NAA5 344 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 OR51L1Q8NGJ5 315 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 OR13C5Q8NGS8 318 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 OR5H6Q8NGV6 325 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 OR6K6Q8NGW6 343 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 MOSPD2Q8NHP6 518 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 PHOSPHO1Q8TCT1 267 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 C15orf40Q8WUR7 153 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 HIST1H2ACQ93077 130 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 RASD2Q96D21 266 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 MVB12AQ96EY5 273 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 LCORQ96JN0 433 aaPredicted RBP9.52□□□□□ -0.89
CD44-210ENST00000434472 TGM7Q96PF1 710 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 OR2M2Q96R28 347 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 ALG12Q9BV10 488 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 BEX2Q9BXY8 128 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 ACTR6Q9GZN1 396 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 MED28Q9H204 178 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 CHRDQ9H2X0 955 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 NANSQ9NR45 359 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 ACOXLQ9NUZ1 547 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 COPS3Q9UNS2 423 aa9.52□□□□□ -0.89
CD44-210ENST00000434472 ARPC4-TTLL3A0A0A6YYG9 625 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 A0A1W2PR77 199 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 C7orf66A4D0T2 115 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 PHYHO14832 338 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 SULT1B1O43704 296 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 EIF4E2O60573 245 aaKnown RBP9.51□□□□□ -0.89
CD44-210ENST00000434472 CPNE3O75131 537 aaKnown RBP9.51□□□□□ -0.89
CD44-210ENST00000434472 TPPPO94811 219 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 RENP00797 406 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 SRMP19623 302 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 AQP2P41181 271 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 AGFG1P52594 562 aaKnown RBP9.51□□□□□ -0.89
CD44-210ENST00000434472 SLC37A1P57057 533 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 CTXN1P60606 82 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 COL19A1Q14993 1142 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 SLC36A2Q495M3 483 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 LINC01590Q5TEZ4 76 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 OGFOD3Q6PK18 319 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 Q6ZS52 159 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 KRT74Q7RTS7 529 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 EXD3Q8N9H8 876 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 OR2T4Q8NH00 348 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 PTPMT1Q8WUK0 201 aaPredicted RBP9.51□□□□□ -0.89
CD44-210ENST00000434472 THRSPQ92748 146 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 YIPF5Q969M3 257 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 HYLS1Q96M11 299 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 Q96M85 177 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 ADAD1Q96M93 576 aaKnown RBP9.51□□□□□ -0.89
CD44-210ENST00000434472 OR14A2Q96R54 314 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 TTTY10Q9BZA0 68 aa9.51□□□□□ -0.89
CD44-210ENST00000434472 SPRTNQ9H040 489 aaPredicted RBP9.51□□□□□ -0.89
CD44-210ENST00000434472 PLEKHA1Q9HB21 404 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms