RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 CHRM4P08173 479 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 HOXB3P14651 431 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 NPPBP16860 134 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 CNR1P21554 472 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 AGTR1P30556 359 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 NTSR1P30989 418 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 P2RY2P41231 377 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 SKP1P63208 163 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 PRR5P85299 388 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 CDK3Q00526 305 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 AIMP2Q13155 320 aaKnown RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 CBFBQ13951 182 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 SERTAD2Q14140 314 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 RPE65Q16518 533 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 ZNF600Q6ZNG1 722 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 FAM71CQ8NEG0 241 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 OR4K13Q8NH42 304 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 FBXO17Q96EF6 278 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 CNTNAP3BQ96NU0 1288 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 GPR174Q9BXC1 333 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 SLC25A32Q9H2D1 315 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 ING1Q9UK53 422 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 RPH3AQ9Y2J0 694 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 TRAV18A0A075B6X5 111 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 TRAV27A0A087WT01 109 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 OR6C68A6NDL8 312 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 FAM171A2A8MVW0 826 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 EEF1E1-BLOC1S5C9J1V9 151 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 K7ESM1 405 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 RNGTTO60942 597 aaKnown RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 RCBTB2O95199 551 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 SNAPINO95295 136 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 CRYBA1P05813 215 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 ITPKBP27987 946 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 CSF2RBP32927 897 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 AKR1C3P42330 323 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 HAAOP46952 286 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 CAPZA1P52907 286 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 NRG3P56975 720 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 CRMP1Q14194 572 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 KHDRBS2Q5VWX1 349 aaKnown RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 TMEM215Q68D42 235 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 TMEM71Q6P5X7 295 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 RNF44Q7L0R7 432 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 ZNF627Q7L945 461 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 FAM122BQ7Z309 247 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 TAF8Q7Z7C8 310 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 COMTD1Q86VU5 262 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 C12orf40Q86WS4 652 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 NAXDQ8IW45 347 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 PUSL1Q8N0Z8 303 aaKnown RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 KCT2Q8NC54 265 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 MORN4Q8NDC4 146 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 OR1S2Q8NGQ3 325 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 OR2L2Q8NH16 312 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 CCDC107Q8WV48 283 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 ZG16BQ96DA0 208 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 LMLNQ96KR4 655 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 SLC17A9Q9BYT1 436 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 SLC38A1Q9H2H9 487 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 HRH4Q9H3N8 390 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 USP36Q9P275 1121 aaKnown RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 ZNF629Q9UEG4 869 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 OPN4Q9UHM6 478 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 MKL2Q9ULH7 1088 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 PCDHB10Q9UN67 800 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 GPR34Q9UPC5 381 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 PCDHGA5Q9Y5G8 931 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 HEBP2Q9Y5Z4 205 aa6.84□□□□□ -1.31
SYNPO2-203ENST00000434046 MYOFQ9NZM1 2061 aa6.84□□□□□ -1.32
SYNPO2-203ENST00000434046 LAMA2P24043 3122 aaKnown RBP6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 PLPP1O14494 284 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 ZNF254O75437 659 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 CTSLP07711 333 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 GKN3PP0CG01 181 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 TEAD1P28347 426 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 AKT2P31751 481 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 BMP8BP34820 402 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 PGDP52209 483 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 PEA15Q15121 130 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 RBMS2Q15434 407 aaKnown RBP6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 COL13A1Q5TAT6 717 aaPredicted RBP6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 DCAF12L2Q5VW00 463 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 B3GNTL1Q67FW5 361 aaPredicted RBP6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 NIPAL3Q6P499 406 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 ZNF620Q6ZNG0 422 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 BMP8AQ7Z5Y6 402 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 MCATQ8IVS2 390 aaKnown RBP6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 SPICQ8N5J4 248 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 OR51S1Q8NGJ8 323 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 OR10R2Q8NGX6 335 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 OR56A3Q8NH54 315 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 OR14A16Q8NHC5 309 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 THEM6Q8WUY1 208 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 NKD1Q969G9 470 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 ARL11Q969Q4 196 aa6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 MRPL48Q96GC5 212 aaKnown RBP6.83□□□□□ -1.32
SYNPO2-203ENST00000434046 ARL5BQ96KC2 179 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms