RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 OR2M2Q96R28 347 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 LMF1Q96S06 567 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 DDOQ99489 341 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 GFI1Q99684 422 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 G6PC3Q9BUM1 346 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 NKX2-4Q9H2Z4 354 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 EMC7Q9NPA0 242 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 ANKRD10Q9NXR5 420 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 NKIRAS2Q9NYR9 191 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 ZNF337Q9Y3M9 751 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 PIAS3Q9Y6X2 628 aa10.8□□□□□ -0.68
CD44-209ENST00000433892 TDRD6O60522 2096 aaKnown RBP10.8□□□□□ -0.68
CD44-209ENST00000433892 EFCAB7A8K855 629 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 NDUFB5O43674 189 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 PRAMEF2O60811 474 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 CTNSO60931 367 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 OR7A10O76100 309 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 GPR3P46089 330 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 RABIFP47224 123 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 EIF2B5Q13144 721 aaKnown RBP10.79□□□□□ -0.68
CD44-209ENST00000433892 ANGPT1Q15389 498 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 UBE2NLQ5JXB2 153 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 SFRP4Q6FHJ7 346 aaPredicted RBP10.79□□□□□ -0.68
CD44-209ENST00000433892 LEG1Q6P5S2 330 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 UNQ9370/PRO34162Q6UXP9 181 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 TMEM184AQ6ZMB5 413 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 PARGQ86W56 976 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 C19orf47Q8N9M1 422 aaKnown RBP10.79□□□□□ -0.68
CD44-209ENST00000433892 ZNF511Q8NB15 262 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 SMIM4Q8WVI0 70 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 C3orf49Q96BT1 292 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 Q96M85 177 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 NMNAT2Q9BZQ4 307 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 RANBP3Q9H6Z4 567 aaPredicted RBP10.79□□□□□ -0.68
CD44-209ENST00000433892 COPZ2Q9P299 210 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 POMT2Q9UKY4 750 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 IGKV1D-42A0A075B6H8 117 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 B4DGG1 531 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 TNFRSF10AO00220 468 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 ARPC3O15145 178 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 PPM1BO75688 479 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 RPP14O95059 124 aaKnown RBP10.79□□□□□ -0.68
CD44-209ENST00000433892 ZFPL1O95159 310 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 GUSBP08236 651 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 GABRG2P18507 467 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 AQP2P41181 271 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 CDKN2AP42771 156 aaKnown RBP10.79□□□□□ -0.68
CD44-209ENST00000433892 OR3A3P47888 321 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 FAM199XQ6PEV8 388 aaPredicted RBP10.79□□□□□ -0.68
CD44-209ENST00000433892 BTN2A1Q7KYR7 527 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 C10orf53Q8N6V4 93 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 MFRPQ9BY79 579 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 TSPAN10Q9H1Z9 355 aaPredicted RBP10.79□□□□□ -0.68
CD44-209ENST00000433892 OR10A5Q9H207 317 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 PRTFDC1Q9NRG1 225 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 UCKL1Q9NWZ5 548 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 CLEC1BQ9P126 229 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 CLDN16Q9Y5I7 305 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 HS3ST3A1Q9Y663 406 aa10.79□□□□□ -0.68
CD44-209ENST00000433892 CACNA1IQ9P0X4 2223 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 LRP4O75096 1905 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 OR5K4A6NMS3 321 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 IFITM5A6NNB3 132 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 ZNF593O00488 134 aaPredicted RBP10.78□□□□□ -0.68
CD44-209ENST00000433892 GSTZ1O43708 216 aaPredicted RBP10.78□□□□□ -0.68
CD44-209ENST00000433892 SSNA1O43805 119 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 GPRIN2O60269 458 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 GMDSO60547 372 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 IFNA16P05015 189 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 IGHV4-34P06331 123 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 CTSEP14091 401 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 CCR4P51679 360 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 RPS4XP62701 263 aaKnown RBP10.78□□□□□ -0.68
CD44-209ENST00000433892 CAMK2BQ13554 666 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 ZSWIM7Q19AV6 140 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 SLC35D3Q5M8T2 416 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 ZBTB37Q5TC79 503 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 LINC01590Q5TEZ4 76 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 STPG1Q5TH74 334 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 SLC22A10Q63ZE4 541 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 FCRLAQ7L513 359 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 LUZP2Q86TE4 346 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 RGP1Q92546 391 aaPredicted RBP10.78□□□□□ -0.68
CD44-209ENST00000433892 ALG12Q9BV10 488 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 S1PR5Q9H228 398 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 FLVCR2Q9UPI3 526 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 RCE1Q9Y256 329 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 MRPS33Q9Y291 106 aaKnown RBP10.78□□□□□ -0.68
CD44-209ENST00000433892 TMA7Q9Y2S6 64 aaKnown RBP10.78□□□□□ -0.68
CD44-209ENST00000433892 ZNF281Q9Y2X9 895 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 MPDZO75970 2070 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 ANKRD61A6NGH8 418 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 PRAMEF26H0Y7S4 382 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 CLDN4O14493 209 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 GPR171O14626 319 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 CTDSPLO15194 276 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 NOS1APO75052 506 aaPredicted RBP10.78□□□□□ -0.68
CD44-209ENST00000433892 GLCEO94923 617 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 CD1AP06126 327 aa10.78□□□□□ -0.68
CD44-209ENST00000433892 PSMD4P55036 377 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms