RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SLC35F4A4IF30 521 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 TMEM221A6NGB7 291 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 C11orf98E9PRG8 122 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 H7C1C5 153 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 M0R296 226 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 TAF4O00268 1085 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 NTN3O00634 580 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-210ENST00000428307 RNF13O43567 381 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 SELENOFO60613 162 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 CPNE3O75131 537 aaKnown RBP9.45□□□□□ -0.9
HDAC9-210ENST00000428307 FGF5P12034 268 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 SPI1P17947 270 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 FGF9P31371 208 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-210ENST00000428307 LCN6P62502 163 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 ZNF45Q02386 682 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 IL11RAQ14626 422 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 TP53I3Q53FA7 332 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 TMEM91Q6ZNR0 172 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 ADGRG3Q86Y34 549 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 LSM14AQ8ND56 463 aaKnown RBP9.45□□□□□ -0.9
HDAC9-210ENST00000428307 FAM83FQ8NEG4 500 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-210ENST00000428307 OR5J2Q8NH18 312 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 NEIL3Q8TAT5 605 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 GPR119Q8TDV5 335 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 SNRNP27Q8WVK2 155 aaKnown RBP9.45□□□□□ -0.9
HDAC9-210ENST00000428307 MR1Q95460 341 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 CNN2Q99439 309 aaKnown RBP9.45□□□□□ -0.9
HDAC9-210ENST00000428307 DDOQ99489 341 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 NPAS1Q99742 590 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 SRA1Q9HD15 236 aaKnown RBP9.45□□□□□ -0.9
HDAC9-210ENST00000428307 TAS2R10Q9NYW0 307 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 GRHPRQ9UBQ7 328 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 FREM2Q5SZK8 3169 aa9.45□□□□□ -0.9
HDAC9-210ENST00000428307 B4DXG7 233 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 PSMD9O00233 223 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 SUSD5O60279 629 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 UPK1BO75841 260 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 OR2J2O76002 312 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 NCR1O76036 304 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 PLGP00747 810 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-210ENST00000428307 KLK3P07288 261 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-210ENST00000428307 AHCYP23526 432 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 GRPRP30550 384 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 DIO1P49895 249 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 SLC26A5P58743 744 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 LGALS3BPQ08380 585 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 POU4F2Q12837 409 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 MADCAM1Q13477 382 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 C11orf91Q3C1V1 193 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 MRPL14Q6P1L8 145 aaKnown RBP9.44□□□□□ -0.9
HDAC9-210ENST00000428307 FAM122BQ7Z309 247 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 CCDC190Q86UF4 302 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 JAZF1Q86VZ6 243 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 BMPERQ8N8U9 685 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 LRRC75AQ8NAA5 344 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 ZNF511Q8NB15 262 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 NUBPLQ8TB37 319 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 LIPHQ8WWY8 451 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 GPX7Q96SL4 187 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-210ENST00000428307 SLC30A2Q9BRI3 323 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 ULBP3Q9BZM4 244 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 INPP5EQ9NRR6 644 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 RXFP3Q9NSD7 469 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 MED11Q9P086 117 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 PLEKHB1Q9UF11 243 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-210ENST00000428307 FBXO4Q9UKT5 387 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 ADAMTS20P59510 1910 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 TMED7-TICAM2A0A0A6YYA0 188 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 HTR3EA5X5Y0 456 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 LOC110117498-PIK3R3F6TDL0 507 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 DCTN6O00399 190 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 ADAM10O14672 748 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 IDH3BO43837 385 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 SDHAP31040 664 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 UQCRC1P31930 480 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 ZFP36L1Q07352 338 aaKnown RBP9.44□□□□□ -0.9
HDAC9-210ENST00000428307 OXA1LQ15070 435 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 STEAP3Q658P3 488 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 TUBA3EQ6PEY2 450 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 VASH1Q7L8A9 365 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-210ENST00000428307 OR5L2Q8NGL0 311 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 RHBDD1Q8TEB9 315 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 SNX33Q8WV41 574 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 TMCO6Q96DC7 493 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 SIAEQ9HAT2 523 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 ABCB9Q9NP78 766 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 FAIMQ9NVQ4 179 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 MYOTQ9UBF9 498 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 VDAC3Q9Y277 283 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 TMED7Q9Y3B3 224 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 PCDHGB6Q9Y5F9 930 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 MPDZO75970 2070 aa9.44□□□□□ -0.9
HDAC9-210ENST00000428307 TRAV36DV7A0A075B6V5 113 aa9.43□□□□□ -0.9
HDAC9-210ENST00000428307 TMEM72A0PK05 275 aa9.43□□□□□ -0.9
HDAC9-210ENST00000428307 ZFAND5O76080 213 aa9.43□□□□□ -0.9
HDAC9-210ENST00000428307 SNX4O95219 450 aa9.43□□□□□ -0.9
HDAC9-210ENST00000428307 IGF2P01344 180 aa9.43□□□□□ -0.9
HDAC9-210ENST00000428307 OR2T7P0C7T2 308 aa9.43□□□□□ -0.9
HDAC9-210ENST00000428307 TCEA1P23193 301 aaKnown RBP9.43□□□□□ -0.9
HDAC9-210ENST00000428307 MPLP40238 635 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms