RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 H3F3AP84243 136 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 SF3A3Q12874 501 aaKnown RBP eCLIP11.2□□□□□ -0.62
SGCE-203ENST00000425444 FAPQ12884 760 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 SLC17A1Q14916 467 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 PPA1Q15181 289 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 HSP90B2PQ58FF3 399 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 RUNDC3AQ59EK9 446 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 TIMM23BQ5SRD1 257 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 C1orf140Q5VVS0 124 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 DHRS4L2Q6PKH6 230 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 DLEU7Q6UYE1 221 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 ATG4DQ86TL0 474 aaPredicted RBP11.2□□□□□ -0.62
SGCE-203ENST00000425444 ARMC8Q8IUR7 673 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 TMEM99Q8N816 258 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 C11orf65Q8NCR3 313 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 OR9K2Q8NGE7 335 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 STK35Q8TDR2 534 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 AKAP1Q92667 903 aaKnown RBP eCLIP11.2□□□□□ -0.62
SGCE-203ENST00000425444 CGREF1Q99674 301 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 PLA2G12AQ9BZM1 189 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 FGFR1OP2Q9NVK5 253 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 PARPBPQ9NWS1 579 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 TAS2R16Q9NYV7 291 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 SELENONQ9NZV5 590 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 GMEB1Q9Y692 573 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 FREM1Q5H8C1 2179 aa11.2□□□□□ -0.62
SGCE-203ENST00000425444 ALPK2Q86TB3 2170 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 OR5H1A6NKK0 313 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 AQP7P3A6NL99 342 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 TMEM229AB2RXF0 380 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 HS3ST1O14792 307 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 GPX2P18283 190 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 ARFIP2P53365 341 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 RGS8P57771 180 aaPredicted RBP11.19□□□□□ -0.62
SGCE-203ENST00000425444 BSPH1Q075Z2 132 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 GLIPR1L2Q4G1C9 344 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 ALG10BQ5I7T1 473 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 NCMAPQ5T1S8 102 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 C9orf135Q5VTT2 229 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 METTL21CQ5VZV1 264 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 TMEM225Q6GV28 225 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 SSX8Q7RTT4 187 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 RETREG3Q86VR2 466 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 P2RY8Q86VZ1 359 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 DPP10Q8N608 796 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 ZNF433Q8N7K0 673 aaPredicted RBP11.19□□□□□ -0.62
SGCE-203ENST00000425444 BHLHE22Q8NFJ8 381 aaPredicted RBP11.19□□□□□ -0.62
SGCE-203ENST00000425444 OR52E4Q8NGH9 312 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 TSPEARQ8WU66 669 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 IGFBPL1Q8WX77 278 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 SLC25A36Q96CQ1 311 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 ANKRD27Q96NW4 1050 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 TMEM204Q9BSN7 226 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 SF3B5Q9BWJ5 86 aaKnown RBP11.19□□□□□ -0.62
SGCE-203ENST00000425444 BEX2Q9BXY8 128 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 MRGBPQ9NV56 204 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 MALT1Q9UDY8 824 aa11.19□□□□□ -0.62
SGCE-203ENST00000425444 TESQ9UGI8 421 aaKnown RBP11.19□□□□□ -0.62
SGCE-203ENST00000425444 A0A1B0GWA3 101 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 TPST1O60507 370 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 KRT33AO76009 404 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 VAMP5O95183 116 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 NTF4P34130 210 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 RPS5P46782 204 aaKnown RBP11.18□□□□□ -0.62
SGCE-203ENST00000425444 IL1RL1Q01638 556 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 SELPLGQ14242 412 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 ADRM1Q16186 407 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 MMEL1Q495T6 779 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 TSPO2Q5TGU0 170 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 ADAM5Q6NVV9 412 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 AAED1Q7RTV5 226 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 COMTD1Q86VU5 262 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 RANBP3LQ86VV4 465 aaPredicted RBP11.18□□□□□ -0.62
SGCE-203ENST00000425444 ZNF611Q8N823 705 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 SMYD1Q8NB12 490 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 OR52N5Q8NH56 324 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 FBXW5Q969U6 566 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 TMEM45BQ96B21 275 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 TRIM2Q9C040 744 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 C12orf10Q9HB07 376 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 TMEM27Q9HBJ8 222 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 SLC7A10Q9NS82 523 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 ZNF446Q9NWS9 450 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 RASD1Q9Y272 281 aa11.18□□□□□ -0.62
SGCE-203ENST00000425444 A0A1W2PR80 420 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 OR2T1O43869 369 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 NPIPB7O75200 414 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 OPN1SWP03999 348 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 PNMTP11086 282 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 HTR2AP28223 471 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 TGFBR3Q03167 851 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 RBBP4Q09028 425 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 MAPRE2Q15555 327 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 TRMT5Q32P41 509 aaKnown RBP11.17□□□□□ -0.62
SGCE-203ENST00000425444 OR7E24Q6IFN5 339 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 C5orf46Q6UWT4 87 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 PTOV1Q86YD1 416 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 SLC30A8Q8IWU4 369 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 LSMEM1Q8N8F7 131 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 POMGNT2Q8NAT1 580 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms