RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 RNF32Q9H0A6 362 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 SLC25A19Q9HC21 320 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 TAS2R16Q9NYV7 291 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 CNOT2Q9NZN8 540 aaKnown RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 DNAJC27Q9NZQ0 273 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 SEC14L4Q9UDX3 406 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.09□□□□□ -1.11
HPS4-204ENST00000422379 RPH3AQ9Y2J0 694 aaPredicted RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 A0A087WV48 116 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 TMED7-TICAM2A0A0A6YYA0 188 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 EFCAB10A6NFE3 127 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 PRKYO43930 277 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 SNX4O95219 450 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 PTHP01270 115 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 GP1BBP13224 206 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 CD46P15529 392 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 ENDOUP21128 410 aaKnown RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 TGFBR2P37173 567 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 PCYT1AP49585 367 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 CTBP2P56545 445 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 ARG2P78540 354 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 PMP22Q01453 160 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 PRKCDQ05655 676 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 CRYZQ08257 329 aaKnown RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 DBPQ10586 325 aaPredicted RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 IRF3Q14653 427 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 TBR1Q16650 682 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 RASSF6Q6ZTQ3 369 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 RRM2BQ7LG56 351 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 GRINAQ7Z429 371 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 BCDIN3DQ7Z5W3 292 aaKnown RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 P2RY8Q86VZ1 359 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 OR4K17Q8NGC6 315 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 OR1J4Q8NGS1 313 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 OR13C2Q8NGS9 318 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 TRUB1Q8WWH5 349 aaKnown RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 EXTL1Q92935 676 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 ARL5BQ96KC2 179 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 POLDIP3Q9BY77 421 aaKnown RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 TMEM185BQ9H7F4 350 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 TVP23BQ9NYZ1 205 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 RPS6KB2Q9UBS0 482 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 IL20RAQ9UHF4 553 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 TMED7Q9Y3B3 224 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 IGSF10Q6WRI0 2623 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 EPG5Q9HCE0 2579 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 MPDZO75970 2070 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 H0YC42 278 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 M0R082 166 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 SUSD5O60279 629 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 GLSO94925 669 aaPredicted RBP8.08□□□□□ -1.12
HPS4-204ENST00000422379 BCL10O95999 233 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 PIPP12273 146 aaPredicted RBP8.08□□□□□ -1.12
HPS4-204ENST00000422379 PEPDP12955 493 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 IFI30P13284 250 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 KLK2P20151 261 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 FPR3P25089 353 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 DPP4P27487 766 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 MSX1P28360 303 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 CASRP41180 1078 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 RBM34P42696 430 aaKnown RBP8.08□□□□□ -1.12
HPS4-204ENST00000422379 POLR2HP52434 150 aaKnown RBP8.08□□□□□ -1.12
HPS4-204ENST00000422379 SMSP52788 366 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 ZNF91Q05481 1191 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 SLC25A25Q6KCM7 469 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 THSD4Q6ZMP0 1018 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.08□□□□□ -1.12
HPS4-204ENST00000422379 YRDCQ86U90 279 aaKnown RBP8.08□□□□□ -1.12
HPS4-204ENST00000422379 ZBTB46Q86UZ6 589 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 TEX47Q8TBZ9 253 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 TBC1D15Q8TC07 691 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 ST8SIA1Q92185 356 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 TAAR8Q969N4 342 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 BPIFA2Q96DR5 249 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 Q96MT0 163 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 BCL7BQ9BQE9 202 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 ZNF703Q9H7S9 590 aaPredicted RBP8.08□□□□□ -1.12
HPS4-204ENST00000422379 ZFP64Q9NPA5 681 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 KRCC1Q9NPI7 259 aaPredicted RBP8.08□□□□□ -1.12
HPS4-204ENST00000422379 SDHAF3Q9NRP4 125 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 ABI3Q9P2A4 366 aa8.08□□□□□ -1.12
HPS4-204ENST00000422379 TRAV27A0A087WT01 109 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 OR2M5A3KFT3 312 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 ELOA3DA6NLF2 546 aaPredicted RBP8.07□□□□□ -1.12
HPS4-204ENST00000422379 FAM166BA8MTA8 275 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 RRP8O43159 456 aaKnown RBP8.07□□□□□ -1.12
HPS4-204ENST00000422379 TLX2O43763 284 aaPredicted RBP8.07□□□□□ -1.12
HPS4-204ENST00000422379 PNMTP11086 282 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 DBTP11182 482 aaKnown RBP8.07□□□□□ -1.12
HPS4-204ENST00000422379 CD36P16671 472 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 LIPAP38571 399 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 MEOX1P50221 254 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 LSM3P62310 102 aaKnown RBP8.07□□□□□ -1.12
HPS4-204ENST00000422379 EFNB1P98172 346 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 OCLNQ16625 522 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 TIGD6Q17RP2 521 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 ELOA3BQ3SY89 546 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 ZNF766Q5HY98 468 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 SLC27A4Q6P1M0 643 aa8.07□□□□□ -1.12
HPS4-204ENST00000422379 TMPRSS11FQ6ZWK6 438 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms