RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 UBDO15205 165 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 IFNA2P01563 188 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 PRG2P13727 222 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 NCF2P19878 526 aaPredicted RBP15.17■□□□□ 0.02
MSH6-203ENST00000420813 POLR2JP52435 117 aaKnown RBP15.17■□□□□ 0.02
MSH6-203ENST00000420813 EFNA4P52798 201 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 TMEM249Q2WGJ8 235 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 GTDC1Q4AE62 458 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 RPS26P11Q5JNZ5 115 aaPredicted RBP15.17■□□□□ 0.02
MSH6-203ENST00000420813 C6orf10Q5SRN2 563 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 PODNL1Q6PEZ8 512 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 CREB3L2Q70SY1 520 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 MAVSQ7Z434 540 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 ZNF525Q8N782 197 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 FAM168AQ92567 244 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 AURKBQ96GD4 344 aaPredicted RBP15.17■□□□□ 0.02
MSH6-203ENST00000420813 ZNF317Q96PQ6 595 aaPredicted RBP15.17■□□□□ 0.02
MSH6-203ENST00000420813 RAD21L1Q9H4I0 556 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 BCL2L10Q9HD36 194 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 TMEM45AQ9NWC5 275 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 NKIRAS1Q9NYS0 192 aa15.17■□□□□ 0.02
MSH6-203ENST00000420813 ZNF587BE7ETH6 402 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 KLF11O14901 512 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 GPRIN2O60269 458 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 KRT33AO76009 404 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 AHSA1O95433 338 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 BMP2P12643 396 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 CDH2P19022 906 aaPredicted RBP15.16■□□□□ 0.02
MSH6-203ENST00000420813 VLDLRP98155 873 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 FADDQ13158 208 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 TBRG1Q3YBR2 411 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 CHRFAM7AQ494W8 412 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 HIKESHIQ53FT3 197 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 C6orf52Q5T4I8 152 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 HMBOX1Q6NT76 420 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 SERPINA11Q86U17 422 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 MIER2Q8N344 545 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 OR9I1Q8NGQ6 314 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 OR1K1Q8NGR3 316 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 MFSD8Q8NHS3 518 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 C10orf105Q8TEF2 133 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 GTF2H4Q92759 462 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 PROX1Q92786 737 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 VPS33AQ96AX1 596 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 OR52B2Q96RD2 323 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 LINC00470Q9BZP3 86 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 MOV10Q9HCE1 1003 aaKnown RBP15.16■□□□□ 0.02
MSH6-203ENST00000420813 A4GALTQ9NPC4 353 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 MOKQ9UQ07 419 aa15.16■□□□□ 0.02
MSH6-203ENST00000420813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.15■□□□□ 0.026e-7■□□□□ 10.2
MSH6-203ENST00000420813 STAB1Q9NY15 2570 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 FBN3Q75N90 2809 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 ARPC4-TTLL3A0A0A6YYG9 625 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 FTCDNL1E5RQL4 147 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 FZD7O75084 574 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 SELENOPP49908 381 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 MAGOHP61326 146 aaKnown RBP15.15■□□□□ 0.02
MSH6-203ENST00000420813 RGNQ15493 299 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 SWI5Q1ZZU3 235 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 C3orf36Q3SXR2 165 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 ZNF311Q5JNZ3 666 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 EPHX4Q8IUS5 362 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 BBS10Q8TAM1 723 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 MAGEE2Q8TD90 523 aaPredicted RBP15.15■□□□□ 0.02
MSH6-203ENST00000420813 HTRA1Q92743 480 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 ALKBH3Q96Q83 286 aaPredicted RBP15.15■□□□□ 0.02
MSH6-203ENST00000420813 KATNB1Q9BVA0 655 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 PAIP1Q9H074 479 aaKnown RBP15.15■□□□□ 0.02
MSH6-203ENST00000420813 C12orf10Q9HB07 376 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 PCDHB14Q9Y5E9 798 aa15.15■□□□□ 0.02
MSH6-203ENST00000420813 IGHV1-18A0A0C4DH31 117 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 CLIC1O00299 241 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 LGI1O95970 557 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 F12P00748 615 aaPredicted RBP15.14■□□□□ 0.01
MSH6-203ENST00000420813 PNMTP11086 282 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 HOXB1P14653 301 aaPredicted RBP15.14■□□□□ 0.01
MSH6-203ENST00000420813 MRPL19P49406 292 aaKnown RBP15.14■□□□□ 0.01
MSH6-203ENST00000420813 SH3BGRP55822 239 aaPredicted RBP15.14■□□□□ 0.01
MSH6-203ENST00000420813 UBE2NP61088 152 aaKnown RBP15.14■□□□□ 0.01
MSH6-203ENST00000420813 EGR4Q05215 589 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 NIPAL3Q6P499 406 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 C5orf46Q6UWT4 87 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 C6orf89Q6UWU4 347 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 ANKK1Q8NFD2 765 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 BCL2L2Q92843 193 aaPredicted RBP15.14■□□□□ 0.01
MSH6-203ENST00000420813 TLCD1Q96CP7 247 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 SLC38A2Q96QD8 506 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 KCNS3Q9BQ31 491 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 PTDSS2Q9BVG9 487 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 TMEM160Q9NX00 188 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 CRNNQ9UBG3 495 aaPredicted RBP15.14■□□□□ 0.01
MSH6-203ENST00000420813 CDC42EP3Q9UKI2 254 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 RCE1Q9Y256 329 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 FKBP7Q9Y680 259 aa15.14■□□□□ 0.01
MSH6-203ENST00000420813 PDE5AO76074 875 aa15.13■□□□□ 0.01
MSH6-203ENST00000420813 CRYAAP02489 173 aa15.13■□□□□ 0.01
MSH6-203ENST00000420813 NUDT7P0C024 238 aa15.13■□□□□ 0.01
MSH6-203ENST00000420813 ETS2P15036 469 aa15.13■□□□□ 0.01
MSH6-203ENST00000420813 HOXB9P17482 250 aaPredicted RBP15.13■□□□□ 0.01
MSH6-203ENST00000420813 GTF2E2P29084 291 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms