RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 M0R082 166 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 PRODHO43272 600 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 RFPL3SP0C7P2 107 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 IMPDH2P12268 514 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 GP2P55259 537 aaKnown RBP15.31■□□□□ 0.04
CALD1-204ENST00000417172 OR7A5Q15622 319 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 GLYR1Q49A26 553 aaPredicted RBP15.31■□□□□ 0.04
CALD1-204ENST00000417172 MEDAGQ5VYS4 303 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 DPY19L2P2Q6ZN68 376 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 GPR141Q7Z602 305 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 ZNF417Q8TAU3 575 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 PTP4A1Q93096 173 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 MUL1Q969V5 352 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 Q96M85 177 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 ZNF587Q96SQ5 575 aaPredicted RBP15.31■□□□□ 0.04
CALD1-204ENST00000417172 RPL36Q9Y3U8 105 aaKnown RBP15.31■□□□□ 0.04
CALD1-204ENST00000417172 TEX13CA0A0J9YWL9 993 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 EFCAB10A6NFE3 127 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 LRRC3CA6NJW4 275 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 RIIAD1A6NNX1 92 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 FTCDNL1E5RQL4 147 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 ZIC3O60481 467 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 PLGP00747 810 aaPredicted RBP15.31■□□□□ 0.04
CALD1-204ENST00000417172 HIST1H2ABP04908 130 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 TSPAN19P0C672 248 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 JUNBP17275 347 aaPredicted RBP15.31■□□□□ 0.04
CALD1-204ENST00000417172 HK1P19367 917 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 SFTPDP35247 375 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 CTXN1P60606 82 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 PRPS1P60891 318 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 ITGADQ13349 1161 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 TOMM20Q15388 145 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 TBC1D25Q3MII6 688 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 ARHGAP11AQ6P4F7 1023 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 PAQR6Q6TCH4 344 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 HIST3H2AQ7L7L0 130 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 MAMDC2Q7Z304 686 aaPredicted RBP15.31■□□□□ 0.04
CALD1-204ENST00000417172 KDM8Q8N371 416 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 SLC37A3Q8NCC5 494 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 OR9Q1Q8NGQ5 310 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 HIST1H2ACQ93077 130 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 LGALS12Q96DT0 336 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 RNFT2Q96EX2 444 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 TMEM41AQ96HV5 264 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 NAA50Q9GZZ1 169 aaKnown RBP15.31■□□□□ 0.04
CALD1-204ENST00000417172 CNOT2Q9NZN8 540 aaKnown RBP15.31■□□□□ 0.04
CALD1-204ENST00000417172 CLEC2DQ9UHP7 191 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 PCDHGB6Q9Y5F9 930 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 CEPT1Q9Y6K0 416 aa15.31■□□□□ 0.04
CALD1-204ENST00000417172 A0A1W2PNR3 127 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 CCDC160A6NGH7 325 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 FAM47E-STBD1D6RA91 191 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 SNX4O95219 450 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 PTHP01270 115 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 RFC3P40938 356 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 OR1C1Q15619 314 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 C11orf91Q3C1V1 193 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 NXNL2Q5VZ03 156 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 NIPAL3Q6P499 406 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 FAM122BQ7Z309 247 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 FAM98AQ8NCA5 519 aaKnown RBP15.3■□□□□ 0.04
CALD1-204ENST00000417172 OR52I1Q8NGK6 324 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 GPX7Q96SL4 187 aaPredicted RBP15.3■□□□□ 0.04
CALD1-204ENST00000417172 NMNAT3Q96T66 252 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 UTP23Q9BRU9 249 aaKnown RBP15.3■□□□□ 0.04
CALD1-204ENST00000417172 OR51V1Q9H2C8 321 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 DKKL1Q9UK85 242 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 BAIAP2Q9UQB8 552 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 PCDHGB1Q9Y5G3 927 aa15.3■□□□□ 0.04
CALD1-204ENST00000417172 HTR3EA5X5Y0 456 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 MT-ATP6P00846 226 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 ADORA3P0DMS8 318 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 PIPP12273 146 aaPredicted RBP15.29■□□□□ 0.04
CALD1-204ENST00000417172 ZNF3P17036 446 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 MTNR1AP48039 350 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.29■□□□□ 0.04
CALD1-204ENST00000417172 MYBPHQ13203 477 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 KLHL12Q53G59 568 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 RAET1LQ5VY80 246 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 C3orf33Q6P1S2 294 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 LSM14AQ8ND56 463 aaKnown RBP15.29■□□□□ 0.04
CALD1-204ENST00000417172 OR4F15Q8NGB8 312 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 OR13F1Q8NGS4 319 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 OR5J2Q8NH18 312 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 DDIT4LQ96D03 193 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 NXPE2Q96DL1 559 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 TSPAN32Q96QS1 320 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 VCX3AQ9NNX9 186 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.29■□□□□ 0.04
CALD1-204ENST00000417172 KIAA1549Q9HCM3 1950 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 SMIM31A0A1B0GVY4 71 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 PRR23D1E9PI22 279 aaPredicted RBP15.29■□□□□ 0.04
CALD1-204ENST00000417172 H7C1C5 153 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 ZNF208O43345 1280 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 CD14P08571 375 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 PRR23D2P0DMB1 279 aaPredicted RBP15.29■□□□□ 0.04
CALD1-204ENST00000417172 AHCYP23526 432 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 DSCR4P56555 118 aaPredicted RBP15.29■□□□□ 0.04
CALD1-204ENST00000417172 LCN6P62502 163 aa15.29■□□□□ 0.04
CALD1-204ENST00000417172 IRF3Q14653 427 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms