RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 C19orf84I3L1E1 186 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 UBOX5O94941 541 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 T-ENOLP0DO92 83 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF43P17038 809 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 TNFRSF1BP20333 461 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 PSMB1P20618 241 aaKnown RBP13.01□□□□□ -0.33
LIMS1-206ENST00000414829 SMIM11AP58511 58 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 C1DQ13901 141 aaKnown RBP13.01□□□□□ -0.33
LIMS1-206ENST00000414829 TRAM2Q15035 370 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 CASP12Q6UXS9 341 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 LINC00114Q6XXX2 140 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 Q6ZT83 130 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF610Q8N9Z0 462 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 OR9K2Q8NGE7 335 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 TAAR8Q969N4 342 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 ASB9Q96DX5 294 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 DACH2Q96NX9 599 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF300Q96RE9 604 aaPredicted RBP13.01□□□□□ -0.33
LIMS1-206ENST00000414829 PRR14Q9BWN1 585 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 C12orf49Q9H741 205 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 MRPL39Q9NYK5 338 aaKnown RBP13.01□□□□□ -0.33
LIMS1-206ENST00000414829 TAS2R1Q9NYW7 299 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 GMPR2Q9P2T1 348 aaKnown RBP13.01□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF229Q9UJW7 825 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 RCE1Q9Y256 329 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 MED31Q9Y3C7 131 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 ENPP4Q9Y6X5 453 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 ICE1Q9Y2F5 2266 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 PCNX1Q96RV3 2341 aa13.01□□□□□ -0.33
LIMS1-206ENST00000414829 M0R082 166 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 OR6A2O95222 327 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 MT-ND1P03886 318 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 HIST1H2ABP04908 130 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 RHCEP18577 417 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 GRPRP30550 384 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 UGT2B10P36537 528 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 PUDPQ08623 228 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 PIN1Q13526 163 aaPredicted RBP13□□□□□ -0.33
LIMS1-206ENST00000414829 EXOC3L2Q2M3D2 409 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 C1QTNF12Q5T7M4 302 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF474Q6S9Z5 364 aaPredicted RBP13□□□□□ -0.33
LIMS1-206ENST00000414829 RINLQ6ZS11 566 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 HIST3H2AQ7L7L0 130 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 CCDC103Q8IW40 242 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 TMEM99Q8N816 258 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 POMGNT2Q8NAT1 580 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 FAM156AQ8NDB6 213 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 STEAP2Q8NFT2 490 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF417Q8TAU3 575 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 HIST1H2ACQ93077 130 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 DNAJA3Q96EY1 480 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 PYURFQ96I23 114 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 LRGUKQ96M69 825 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 OXGR1Q96P68 337 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF587Q96SQ5 575 aaPredicted RBP13□□□□□ -0.33
LIMS1-206ENST00000414829 NDEL1Q9GZM8 345 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 NANSQ9NR45 359 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF226Q9NYT6 803 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 ING1Q9UK53 422 aaPredicted RBP13□□□□□ -0.33
LIMS1-206ENST00000414829 GPR52Q9Y2T5 361 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 NOX1Q9Y5S8 564 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 FLVCR1Q9Y5Y0 555 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 HECTD1Q9ULT8 2610 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
LIMS1-206ENST00000414829 CASKO14936 926 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 LYPD3O95274 346 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 BGLAPP02818 100 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 IL32P24001 234 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 IL1RL1Q01638 556 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 PMS2P3Q13401 168 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 TRIM25Q14258 630 aaKnown RBP12.99□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF74Q16587 644 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 LCN8Q6JVE9 175 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 RRM2BQ7LG56 351 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 NUFIP2Q7Z417 695 aaKnown RBP12.99□□□□□ -0.33
LIMS1-206ENST00000414829 HDDC2Q7Z4H3 204 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 DHFR2Q86XF0 187 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 CDK20Q8IZL9 346 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 RNF113BQ8IZP6 322 aaKnown RBP12.99□□□□□ -0.33
LIMS1-206ENST00000414829 OR5J2Q8NH18 312 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 KISS1RQ969F8 398 aaPredicted RBP12.99□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF347Q96SE7 839 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 BTBD10Q9BSF8 475 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 AMBRA1Q9C0C7 1298 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 MALT1Q9UDY8 824 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 A4GNTQ9UNA3 340 aa12.99□□□□□ -0.33
LIMS1-206ENST00000414829 FLNBO75369 2602 aaKnown RBP12.99□□□□□ -0.33
LIMS1-206ENST00000414829 DOCK7Q96N67 2140 aa12.98□□□□□ -0.33
LIMS1-206ENST00000414829 A0A1W2PRQ8 180 aa12.98□□□□□ -0.33
LIMS1-206ENST00000414829 SH3D21A4FU49 640 aa12.98□□□□□ -0.33
LIMS1-206ENST00000414829 ENO4A6NNW6 628 aa12.98□□□□□ -0.33
LIMS1-206ENST00000414829 ZNF814B7Z6K7 855 aa12.98□□□□□ -0.33
LIMS1-206ENST00000414829 KPNA4O00629 521 aaPredicted RBP12.98□□□□□ -0.33
LIMS1-206ENST00000414829 FABP3P05413 133 aa12.98□□□□□ -0.33
LIMS1-206ENST00000414829 H1F0P07305 194 aaKnown RBP12.98□□□□□ -0.33
LIMS1-206ENST00000414829 UMPSP11172 480 aa12.98□□□□□ -0.33
LIMS1-206ENST00000414829 KLK2P20151 261 aa12.98□□□□□ -0.33
LIMS1-206ENST00000414829 COL8A1P27658 744 aa12.98□□□□□ -0.33
LIMS1-206ENST00000414829 P2RY4P51582 365 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms