RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 MS4A18H0YCH9 400 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 CDC42EP2O14613 210 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 SMAD9O15198 467 aaKnown RBP13.6□□□□□ -0.23
LSM5-207ENST00000410044 CYTIPO60759 359 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 AKR7A3O95154 331 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 VAMP5O95183 116 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 BAG2O95816 211 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 PRKACGP22612 351 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 CA7P43166 264 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 RPS4XP62701 263 aaKnown RBP13.6□□□□□ -0.23
LSM5-207ENST00000410044 COX10Q12887 443 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 LAPTM4AQ15012 233 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 PON3Q15166 354 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 MS4A18Q3C1V0 323 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 C1orf185Q5T7R7 199 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 GTF2IRD2BQ6EKJ0 949 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 FAHD1Q6P587 224 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 NHLRC1Q6VVB1 395 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 GTF2IRD2Q86UP8 949 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 HS3ST5Q8IZT8 346 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 LRRC17Q8N6Y2 441 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 TMEM99Q8N816 258 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 OR9Q2Q8NGE9 314 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 RELTQ969Z4 430 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 FAM46AQ96IP4 442 aaKnown RBP13.6□□□□□ -0.23
LSM5-207ENST00000410044 SF3B5Q9BWJ5 86 aaKnown RBP13.6□□□□□ -0.23
LSM5-207ENST00000410044 RNF122Q9H9V4 155 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 GP6Q9HCN6 339 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 CHST11Q9NPF2 352 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 TAS2R5Q9NYW4 299 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 HIF3AQ9Y2N7 669 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 FAM215AQ9Y5M1 114 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 MAGED1Q9Y5V3 778 aaPredicted RBP13.6□□□□□ -0.23
LSM5-207ENST00000410044 MED12LQ86YW9 2145 aa13.6□□□□□ -0.23
LSM5-207ENST00000410044 MBD3L4A6NDZ8 208 aaPredicted RBP13.59□□□□□ -0.23
LSM5-207ENST00000410044 MBD3L3A6NE82 208 aaPredicted RBP13.59□□□□□ -0.23
LSM5-207ENST00000410044 MBD3L5A6NJ08 208 aaPredicted RBP13.59□□□□□ -0.23
LSM5-207ENST00000410044 ZNF814B7Z6K7 855 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 E9PLN8 166 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 M0R082 166 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 PLPP3O14495 311 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 CASQ2O14958 399 aaPredicted RBP13.59□□□□□ -0.23
LSM5-207ENST00000410044 TGM6O95932 706 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 ADAP00813 363 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 HIST1H2ABP04908 130 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 ZNF23P17027 643 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 GSTM3P21266 225 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 TIMP3P35625 211 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 SLC16A1P53985 500 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 NUP107P57740 925 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 POU4F3Q15319 338 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 ZBED5Q49AG3 693 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 OTUD3Q5T2D3 398 aaPredicted RBP13.59□□□□□ -0.23
LSM5-207ENST00000410044 ABLIM2Q6H8Q1 611 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 SEM1Q6ZVN7 128 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 FCRLAQ7L513 359 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 HIST3H2AQ7L7L0 130 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 C10orf53Q8N6V4 93 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 AQP11Q8NBQ7 271 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 MBD3L2Q8NHZ7 208 aaPredicted RBP13.59□□□□□ -0.23
LSM5-207ENST00000410044 ZNF417Q8TAU3 575 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 FNDC9Q8TBE3 224 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 RNF128Q8TEB7 428 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 DNAJC9Q8WXX5 260 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 ROBO4Q8WZ75 1007 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 HIST1H2ACQ93077 130 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 DNAJA3Q96EY1 480 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 OXGR1Q96P68 337 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 TRIB1Q96RU8 372 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 ZNF587Q96SQ5 575 aaPredicted RBP13.59□□□□□ -0.23
LSM5-207ENST00000410044 VKORC1Q9BQB6 163 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 RNPEPL1Q9HAU8 725 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 GLRX2Q9NS18 164 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 OAZ3Q9UMX2 235 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 RASD1Q9Y272 281 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 SIGLEC7Q9Y286 467 aa13.59□□□□□ -0.23
LSM5-207ENST00000410044 DOCK7Q96N67 2140 aa13.58□□□□□ -0.23
LSM5-207ENST00000410044 IGKV3D-15A0A087WSY6 115 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 A0A1W2PNV4 684 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 UNC119BA6NIH7 251 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 SLC22A20A6NK97 555 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 ZNF716A6NP11 495 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 AQP8O94778 261 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 RCBTB2O95199 551 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 SAGP10523 405 aaPredicted RBP13.58□□□□□ -0.24
LSM5-207ENST00000410044 FCGR2AP12318 317 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 KLK2P20151 261 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 GTF2E2P29084 291 aaKnown RBP13.58□□□□□ -0.24
LSM5-207ENST00000410044 UQCRC1P31930 480 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 CEACAM8P31997 349 aaPredicted RBP13.58□□□□□ -0.24
LSM5-207ENST00000410044 GPR4P46093 362 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 DAPP51397 102 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 CASP6P55212 293 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 PMS2P3Q13401 168 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 MRPL49Q13405 166 aaKnown RBP13.58□□□□□ -0.24
LSM5-207ENST00000410044 RNPS1Q15287 305 aaKnown RBP13.58□□□□□ -0.24
LSM5-207ENST00000410044 IGFBP7Q16270 282 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 TMEM225Q6GV28 225 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 RPTNQ6XPR3 784 aa13.58□□□□□ -0.24
LSM5-207ENST00000410044 B3GNT6Q6ZMB0 384 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms