RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 MFN2O95140 757 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 MPGP29372 298 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 AQP1P29972 269 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 RPS5P46782 204 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 FAM91A1Q658Y4 838 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 ULK3Q6PHR2 472 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 KLHL17Q6TDP4 642 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 TMEM108Q6UXF1 575 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 PTOV1Q86YD1 416 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 ARMC8Q8IUR7 673 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 SLC25A36Q96CQ1 311 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 BDH2Q9BUT1 245 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 TESQ9UGI8 421 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 MGAT4BQ9UQ53 548 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 ZFHX3Q15911 3703 aa17.23■□□□□ 0.35
TSPAN4-209ENST00000409543 ABCD4O14678 606 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 OR2T1O43869 369 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 SOD3P08294 240 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 PTAFRP25105 342 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 ZNF83P51522 516 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 PCBP3P57721 371 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 MTPNP58546 118 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 NFYCQ13952 458 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 CYP51A1Q16850 503 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 ALG10BQ5I7T1 473 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 C9orf135Q5VTT2 229 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 ABHD12BQ7Z5M8 362 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 EPHX4Q8IUS5 362 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 WDR31Q8NA23 367 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 SLC38A4Q969I6 547 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 SLC47A1Q96FL8 570 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 PRR14Q9BWN1 585 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 TMEM120AQ9BXJ8 343 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 SLC17A5Q9NRA2 495 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 CISD1Q9NZ45 108 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 SLC13A4Q9UKG4 626 aa17.22■□□□□ 0.35
TSPAN4-209ENST00000409543 IGKV1D-42A0A075B6H8 117 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 A0A1W2PR80 420 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 OR6C65A6NJZ3 312 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 GTF2E2P29084 291 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 ATP5J2P56134 94 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 RGS8P57771 180 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 NCALDP61601 193 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 DMTNQ08495 405 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 SELPLGQ14242 412 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 PGGHGQ32M88 737 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 FAM69AQ5T7M9 428 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 NET1Q7Z628 596 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 TAAR8Q969N4 342 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 BOD1Q96IK1 185 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 COX4I2Q96KJ9 171 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 SMR3AQ99954 134 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 KAT8Q9H7Z6 458 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 TMEM27Q9HBJ8 222 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 MRGBPQ9NV56 204 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 SELENONQ9NZV5 590 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 AMDHD2Q9Y303 409 aa17.21■□□□□ 0.35
TSPAN4-209ENST00000409543 TRAV36DV7A0A075B6V5 113 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 A0A087WUJ7 227 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 H7C1Q1 480 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 KRT33AO76009 404 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 CD40P25942 277 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 SELENOPP49908 381 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 CDH11P55287 796 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 OR1Q1Q15612 314 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 RANBP3LQ86VV4 465 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 SLC30A8Q8IWU4 369 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 CIARTQ8N365 385 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 TRMT61AQ96FX7 289 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 OXGR1Q96P68 337 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 GRIP2Q9C0E4 1043 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 FAIMQ9NVQ4 179 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 ZNF446Q9NWS9 450 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 B3GALT5Q9Y2C3 310 aa17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 MAGED1Q9Y5V3 778 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-209ENST00000409543 A0A0B4J2E0 115 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 A0A1B0GX12 115 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 TRIM64A6NGJ6 449 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 TRIM64BA6NI03 449 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 FAM171A2A8MVW0 826 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 M0QX08 132 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 M0R1B8 84 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 FBP2O00757 339 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 AIM2O14862 343 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 TPST2O60704 377 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 LGI1O95970 557 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 C8BP07358 591 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 ZNF43P17038 809 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 PRPS1P60891 318 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 SWT1Q5T5J6 900 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 NIPAL3Q6P499 406 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 DTX2Q86UW9 622 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 KDM8Q8N371 416 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 SMYD1Q8NB12 490 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 OR6S1Q8NH40 331 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 GTPBP3Q969Y2 492 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 ARHGDIGQ99819 225 aa17.19■□□□□ 0.34
TSPAN4-209ENST00000409543 WFDC6Q9BQY6 131 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms