RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 NDUFS1P28331 727 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 GRK6P43250 576 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF81P51508 661 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 CTXN1P60606 82 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 FCRL6Q6DN72 434 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 SSX6Q7RTT6 188 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 GPAT4Q86UL3 456 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF681Q96N22 645 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 DPCDQ9BVM2 203 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 DPAGT1Q9H3H5 408 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 MKKSQ9NPJ1 570 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 ASB6Q9NWX5 421 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 KCNE5Q9UJ90 142 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 FREM3P0C091 2139 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 PLRG1O43660 514 aaKnown RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 PROS1P07225 676 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 YOD1Q5VVQ6 348 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 MRM1Q6IN84 353 aaKnown RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 PAQR7Q86WK9 346 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 LRRC28Q86X40 367 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 SIAH3Q8IW03 269 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF619Q8N2I2 560 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 PIAS4Q8N2W9 510 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF676Q8N7Q3 588 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 ZPLD1Q8TCW7 415 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 TBL1XR1Q9BZK7 514 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 KCNK15Q9H427 330 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF576Q9H609 170 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 LYARQ9NX58 379 aaKnown RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 KLHL21Q9UJP4 597 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 MCIDASD6RGH6 385 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 SLC43A1O75387 559 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 IL12BP29460 328 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 MELKQ14680 651 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 PON3Q15166 354 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 POU4F3Q15319 338 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 PTP4A1Q93096 173 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 SERINC2Q96SA4 455 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 GON7Q9BXV9 100 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 OR11A1Q9GZK7 315 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 SPARCP09486 303 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 UBE2MP61081 183 aaKnown RBP12.29□□□□□ -0.44
COL6A2-204ENST00000409416 KIRREL2Q6UWL6 708 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 MOSPD2Q8NHP6 518 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 PHOSPHO2Q8TCD6 241 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 GIMAP5Q96F15 307 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 PITHD1Q9GZP4 211 aaPredicted RBP12.29□□□□□ -0.44
COL6A2-204ENST00000409416 TMEM5Q9Y2B1 443 aa12.29□□□□□ -0.44
COL6A2-204ENST00000409416 ARPC4-TTLL3A0A0A6YYG9 625 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 SLC22A31A6NKX4 558 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 ADAM11O75078 769 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 MTRF1O75570 445 aaKnown RBP12.28□□□□□ -0.44
COL6A2-204ENST00000409416 CDONQ4KMG0 1287 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 C11orf88Q6PI97 169 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 CD200R1LQ6Q8B3 271 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 CHMP1BQ7LBR1 199 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 TCTE3Q8IZS6 198 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 NSMAFQ92636 917 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 FGF11Q92914 225 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 PPP1R14AQ96A00 147 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 C8orf44Q96CB5 159 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 DERL3Q96Q80 235 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF304Q9HCX3 659 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 ISYNA1Q9NPH2 558 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 MRPS18AQ9NVS2 196 aaKnown RBP12.28□□□□□ -0.44
COL6A2-204ENST00000409416 RPH3AQ9Y2J0 694 aaPredicted RBP12.28□□□□□ -0.44
COL6A2-204ENST00000409416 ZFHX2Q9C0A1 2572 aaPredicted RBP12.28□□□□□ -0.44
COL6A2-204ENST00000409416 I3L521 148 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 NUPL2O15504 423 aaKnown RBP12.28□□□□□ -0.44
COL6A2-204ENST00000409416 CXCL3P19876 107 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 MTNR1BP49286 362 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF136P52737 540 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 MED25Q71SY5 747 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 SLC22A18ASQ8N1D0 253 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 C1orf216Q8TAB5 229 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 HSD17B8Q92506 261 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 KLHDC3Q9BQ90 382 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 MARVELD1Q9BSK0 173 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 AUNIPQ9H7T9 357 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 SEC61A2Q9H9S3 476 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 TMEM138Q9NPI0 162 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 ANKRD10Q9NXR5 420 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 ATPIF1Q9UII2 106 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 MASP2O00187 686 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 ZNHIT1O43257 154 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 IFNGP01579 166 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 RNH1P13489 461 aaKnown RBP12.28□□□□□ -0.44
COL6A2-204ENST00000409416 ENPP1P22413 925 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 PRSS12P56730 875 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 GALEQ14376 348 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 GRM7Q14831 915 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 MEP1BQ16820 701 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 MARCH3Q86UD3 253 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 PLCZ1Q86YW0 608 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 OR51Q1Q8NH59 317 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 THAP4Q8WY91 577 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 ACOT12Q8WYK0 555 aa12.28□□□□□ -0.44
COL6A2-204ENST00000409416 OR51J1Q9H342 316 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms