RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 ZNF227Q86WZ6 799 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 C10orf111Q8N326 155 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 SLC37A3Q8NCC5 494 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 FAM71F1Q96KD3 344 aaPredicted RBP8.32□□□□□ -1.08
LIG4-202ENST00000405925 CALHM2Q9HA72 323 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 TAS2R16Q9NYV7 291 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 KLHL13Q9P2N7 655 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 MYOTQ9UBF9 498 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 PILRAQ9UKJ1 303 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 STUB1Q9UNE7 303 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 ADAM18Q9Y3Q7 739 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 ZFHX2Q9C0A1 2572 aaPredicted RBP8.32□□□□□ -1.08
LIG4-202ENST00000405925 A0A1W2PQM1 296 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 EIF1BO60739 113 aaKnown RBP8.32□□□□□ -1.08
LIG4-202ENST00000405925 ENPP1P22413 925 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 DUSP2Q05923 314 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 ISXQ2M1V0 245 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 BCL2L15Q5TBC7 163 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 GLT8D1Q68CQ7 371 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 ACSM5Q6NUN0 579 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 DPY19L2P2Q6ZN68 376 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 ZNF620Q6ZNG0 422 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 H1FNTQ75WM6 255 aaPredicted RBP8.32□□□□□ -1.08
LIG4-202ENST00000405925 BTN2A1Q7KYR7 527 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 DPY19L4Q7Z388 723 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 SLC22A16Q86VW1 577 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 SAMD12Q8N8I0 201 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 RHOXF1Q8NHV9 184 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 CT55Q8WUE5 264 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 ZNF764Q96H86 408 aaPredicted RBP8.32□□□□□ -1.08
LIG4-202ENST00000405925 DEFB127Q9H1M4 99 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 MED17Q9NVC6 651 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 ING3Q9NXR8 418 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 PLA2G3Q9NZ20 509 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 WIF1Q9Y5W5 379 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 SPTAN1Q13813 2472 aaKnown RBP8.32□□□□□ -1.08
LIG4-202ENST00000405925 TANC1Q9C0D5 1861 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 TRBV5-3A0A0A0MS03 114 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 KDM4BO94953 1096 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 MT-ATP6P00846 226 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 CTSBP07858 339 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 FBXO45P0C2W1 286 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 OR8G3PP0DMU2 310 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 PNLIPP16233 465 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 EPHA2P29317 976 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 TRAM1Q15629 374 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 OR5AK2Q8NH90 309 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 ST8SIA1Q92185 356 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 ZNF681Q96N22 645 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 BCL2L14Q9BZR8 327 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 IFT46Q9NQC8 304 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 GRIP1Q9Y3R0 1128 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 MUC6Q6W4X9 2439 aa8.32□□□□□ -1.08
LIG4-202ENST00000405925 UBE2QL1A1L167 161 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 HTR3EA5X5Y0 456 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 METTL21EPA6NDL7 271 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 H0YC42 278 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 MAS1P04201 325 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 MAKP20794 623 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 GRK5P34947 590 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 CLPPQ16740 277 aaPredicted RBP8.31□□□□□ -1.08
LIG4-202ENST00000405925 SLC23A3Q6PIS1 610 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 ASB18Q6ZVZ8 466 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 MFRPQ9BY79 579 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 ACOT13Q9NPJ3 140 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 OSGIN1Q9UJX0 560 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 TCFL5Q9UL49 500 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 SCN2AQ99250 2005 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 SSNA1O43805 119 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 PRICKLE3O43900 615 aaPredicted RBP8.31□□□□□ -1.08
LIG4-202ENST00000405925 SLC43A1O75387 559 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 POU3F4P49335 361 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 MAN2A2P49641 1150 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 ADARB1P78563 741 aaKnown RBP8.31□□□□□ -1.08
LIG4-202ENST00000405925 FOXF1Q12946 379 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 CBX3Q13185 183 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 FGFBP1Q14512 234 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 SEC23BQ15437 767 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 TBCEQ15813 527 aaPredicted RBP8.31□□□□□ -1.08
LIG4-202ENST00000405925 ACER2Q5QJU3 275 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 GALNTL5Q7Z4T8 443 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 SIMC1Q8NDZ2 872 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 OR13C3Q8NGS6 347 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 SETD6Q8TBK2 473 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 BRIX1Q8TDN6 353 aaKnown RBP8.31□□□□□ -1.08
LIG4-202ENST00000405925 KCNE4Q8WWG9 221 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 NANOS1Q8WY41 292 aaKnown RBP8.31□□□□□ -1.08
LIG4-202ENST00000405925 C7orf34Q96L11 122 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 FCRL1Q96LA6 429 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 ZNF582Q96NG8 517 aaPredicted RBP8.31□□□□□ -1.08
LIG4-202ENST00000405925 OR51E2Q9H255 320 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 SP140LQ9H930 580 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 NOSIPQ9Y314 301 aaKnown RBP8.31□□□□□ -1.08
LIG4-202ENST00000405925 MKRN2OSH3BPM6 223 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 SYT7O43581 403 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 RGS9O75916 674 aaPredicted RBP8.31□□□□□ -1.08
LIG4-202ENST00000405925 IFNGR1P15260 489 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 EMP3P54852 163 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 PSG6Q00889 435 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 SELENBP1Q13228 472 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms