RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 APMAPQ9HDC9 416 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 NOX1Q9Y5S8 564 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 A0A0B4J2E0 115 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 A0A1B0GX12 115 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 A0A1W2PNU3 283 aaPredicted RBP14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ANKRD34BA5PLL1 514 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 INMT-MINDY4F8WBC2 141 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ZNF749O43361 778 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 C1QBP02746 253 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 GUSBP08236 651 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SLC6A6P31641 620 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SLC16A1P53985 500 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 RRAS2P62070 204 aaPredicted RBP14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 FAPQ12884 760 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 BICRALQ6AI39 1079 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PWWP2BQ6NUJ5 590 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SFXN4Q6P4A7 337 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ARHGAP11AQ6P4F7 1023 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PAMR1Q6UXH9 720 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 VASH1Q7L8A9 365 aaPredicted RBP14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 CEACAM19Q7Z692 300 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PXKQ7Z7A4 578 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 OR4M1Q8NGD0 313 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 DOK4Q8TEW6 326 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 HOXB13Q92826 284 aaPredicted RBP14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 MEPEQ9NQ76 525 aaPredicted RBP14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 CUTCQ9NTM9 273 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SLC39A1Q9NY26 324 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SRPK3Q9UPE1 567 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 MAU2Q9Y6X3 613 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PIEZO1Q92508 2521 aa14.57□□□□□ -0.08
CHRFAM7A-203ENST00000401522 GXYLT2A0PJZ3 443 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 A6NL46 340 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 E9PI62 339 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 FOXS1O43638 330 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 GALR3O60755 368 aaPredicted RBP14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 NKX2-2O95096 273 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SPTBP11277 2137 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PEPDP12955 493 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ARSBP15848 533 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PITPNBP48739 271 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 GZMKP49863 264 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 NRG3P56975 720 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 EFR3AQ14156 821 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 EXOSC7Q15024 291 aaKnown RBP14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PRAMEF17Q5VTA0 474 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 RTL4Q6ZR62 310 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PLCZ1Q86YW0 608 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 MS4A15Q8N5U1 240 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SAMD12Q8N8I0 201 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 TMEM52Q8NDY8 209 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SMPDL3BQ92485 455 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 CTHRC1Q96CG8 243 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 MVB12AQ96EY5 273 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 C4orf36Q96KX1 117 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 LRFN5Q96NI6 719 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PPIL3Q9H2H8 161 aaKnown RBP14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 RPRD1BQ9NQG5 326 aaKnown RBP14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ACOXLQ9NUZ1 547 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ZMIZ1Q9ULJ6 1067 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 RASD1Q9Y272 281 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 KIF26BQ2KJY2 2108 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 TRAV27A0A087WT01 109 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 J3QLW9 94 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ARHGEF9O43307 516 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SCRG1O75711 98 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SC5DO75845 299 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 TIAF1O95411 115 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 EIF4EP06730 217 aaKnown RBP14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 MRPL3P09001 348 aaKnown RBP14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 JMJD7P0C870 316 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ZNF19P17023 458 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SLC6A1P30531 599 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PLAURQ03405 335 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ZNF85Q03923 595 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SLC3A1Q07837 685 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 TNK1Q13470 666 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 CRMP1Q14194 572 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 GPR176Q14439 515 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 DCAF12Q5T6F0 453 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 DMKNQ6E0U4 476 aaPredicted RBP14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 RHBDD2Q6NTF9 364 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 TTLL10Q6ZVT0 673 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PRSS41Q7RTY9 318 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 GRAMD2AQ8IUY3 354 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 CA13Q8N1Q1 262 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 GRHL3Q8TE85 626 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 CNOT9Q92600 299 aaKnown RBP14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 TRIM63Q969Q1 353 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 TAAR9Q96RI9 348 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ZPBPQ9BS86 351 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 THAP7Q9BT49 309 aaPredicted RBP14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ZNF426Q9BUY5 554 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 DDA1Q9BW61 102 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 TRIM2Q9C040 744 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 KNTC1P50748 2209 aa14.56□□□□□ -0.08
CHRFAM7A-203ENST00000401522 A0A0G2JK05 382 aa14.55□□□□□ -0.08
CHRFAM7A-203ENST00000401522 A0A1B0GWA3 101 aa14.55□□□□□ -0.08
CHRFAM7A-203ENST00000401522 NSA2O95478 260 aaKnown RBP14.55□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PPP1R3DO95685 299 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms