RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 RPS11P62280 158 aaKnown RBP eCLIP22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 FGL1Q08830 312 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 DEFB134Q4QY38 66 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 NUDT18Q6ZVK8 323 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 MTSS1LQ765P7 747 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 RAB42Q8N4Z0 105 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 SLAIN1Q8ND83 568 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 OR2L3Q8NG85 312 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 C1orf216Q8TAB5 229 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 SMIM19Q96E16 107 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 RNF208Q9H0X6 261 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 KLF15Q9UIH9 416 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 SPTBN5Q9NRC6 3674 aaKnown RBP22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 CACNA1IQ9P0X4 2223 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 TBC1D3BA6NDS4 549 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 CSRP2Q16527 193 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 EID2Q8N6I1 236 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 SDR9C7Q8NEX9 313 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 OR4E2Q8NGC2 313 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 OR10K1Q8NGX5 313 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 ANKRD10Q9NXR5 420 aa22.05■■□□□ 1.12
CSNK1E-203ENST00000396832 OGG1O15527 345 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 CDC123O75794 336 aaPredicted RBP22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 HOXB1P14653 301 aaPredicted RBP22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 P2RX1P51575 399 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 CDK5R1Q15078 307 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 SLC39A5Q6ZMH5 540 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 ZNF433Q8N7K0 673 aaPredicted RBP22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 BPIFA2Q96DR5 249 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 GPR174Q9BXC1 333 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 MFFQ9GZY8 342 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 TAS2R3Q9NYW6 316 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 F5H5P2 479 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 GOSR2O14653 212 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 LDB3O75112 727 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 SRMP19623 302 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 MECP2P51608 486 aaKnown RBP22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 GMFBP60983 142 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 IL10RAQ13651 578 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 FGL2Q14314 439 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 ZIC1Q15915 447 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 TMEM35AQ53FP2 167 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 TMEM69Q5SWH9 247 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 DCAF12L2Q5VW00 463 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 C12orf76Q8N812 135 aaPredicted RBP22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 BPIFCQ8NFQ6 507 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 OR6K3Q8NGY3 331 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 PELI1Q96FA3 418 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 PTCHD1Q96NR3 888 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 GFI1Q99684 422 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 MFRPQ9BY79 579 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 SLC25A32Q9H2D1 315 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 CALML5Q9NZT1 146 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 DEC1Q9P2X7 70 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 MLXQ9UH92 298 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 KCNE5Q9UJ90 142 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 MRPS23Q9Y3D9 190 aaKnown RBP22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 GON4LQ3T8J9 2241 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 PRAMEF2O60811 474 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 DPP4P27487 766 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 PM20D2Q8IYS1 436 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 DNAAF1Q8NEP3 725 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 TMIEQ8NEW7 156 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 S100A16Q96FQ6 103 aaKnown RBP22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 DNTTIP1Q9H147 329 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 NOX4Q9NPH5 578 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 POT1Q9NUX5 634 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 ACTR10Q9NZ32 417 aa22.04■■□□□ 1.12
CSNK1E-203ENST00000396832 IFITM5A6NNB3 132 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 IDSB3KWA1 339 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 FKTNO75072 461 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 HSD17B2P37059 387 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 FNTBP49356 437 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 ART1P52961 327 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 LRRN1Q6UXK5 716 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 RANBP3LQ86VV4 465 aaPredicted RBP22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 OR4K13Q8NH42 304 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 SUSD6Q92537 303 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 TRBV2A0A0J9YWF9 115 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 ANKRD61A6NGH8 418 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 SLC2A5P22732 501 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 SIRPAP78324 504 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 IRF4Q15306 451 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 FAM74A1Q5RGS3 127 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 STPG1Q5TH74 334 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 SYNPRQ8TBG9 265 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 NARS2Q96I59 477 aaKnown RBP22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 SEMA4CQ9C0C4 833 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 ZNF223Q9UK11 482 aaPredicted RBP22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 FOXJ3Q9UPW0 622 aa22.03■■□□□ 1.12
CSNK1E-203ENST00000396832 TRAPPC13A5PLN9 417 aa22.02■■□□□ 1.12
CSNK1E-203ENST00000396832 LRRC72A6NJI9 287 aa22.02■■□□□ 1.12
CSNK1E-203ENST00000396832 RIIAD1A6NNX1 92 aa22.02■■□□□ 1.12
CSNK1E-203ENST00000396832 MPGP29372 298 aa22.02■■□□□ 1.12
CSNK1E-203ENST00000396832 ACTC1P68032 377 aa22.02■■□□□ 1.12
CSNK1E-203ENST00000396832 ACTA1P68133 377 aa22.02■■□□□ 1.12
CSNK1E-203ENST00000396832 ELP2Q6IA86 826 aa22.02■■□□□ 1.12
CSNK1E-203ENST00000396832 SLC36A1Q7Z2H8 476 aa22.02■■□□□ 1.12
CSNK1E-203ENST00000396832 LRRC25Q8N386 305 aaPredicted RBP22.02■■□□□ 1.12
CSNK1E-203ENST00000396832 ZNF707Q96C28 371 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms