RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 SERPINA11Q86U17 422 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 KDM8Q8N371 416 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 ANKS4BQ8N8V4 417 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 OR1K1Q8NGR3 316 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 SLC38A5Q8WUX1 472 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 TMEM158Q8WZ71 300 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 TMEM19Q96HH6 336 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 SLC38A2Q96QD8 506 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 KCNS3Q9BQ31 491 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 CHODLQ9H9P2 273 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 TMEM45AQ9NWC5 275 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 CHST2Q9Y4C5 530 aa16.79■□□□□ 0.28
COL11A2-204ENST00000395194 A8MVM7 634 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 HDAC3O15379 428 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 CSF3P09919 207 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 WDR4P57081 412 aaKnown RBP16.78■□□□□ 0.28
COL11A2-204ENST00000395194 HOXC5Q00444 222 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 LRRC74AQ0VAA2 488 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 SWI5Q1ZZU3 235 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 TNFAIP8L3Q5GJ75 292 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 ABHD12BQ7Z5M8 362 aaPredicted RBP16.78■□□□□ 0.28
COL11A2-204ENST00000395194 OR9I1Q8NGQ6 314 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 PROX1Q92786 737 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 VPS33AQ96AX1 596 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 SLC25A36Q96CQ1 311 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 VRK1Q99986 396 aaPredicted RBP16.78■□□□□ 0.28
COL11A2-204ENST00000395194 SEC61A2Q9H9S3 476 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 TPT1P8Q9HAU6 139 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 CALML5Q9NZT1 146 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 FKBP7Q9Y680 259 aa16.78■□□□□ 0.28
COL11A2-204ENST00000395194 TRPC5OSA6NMA1 111 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 UPK3AO75631 287 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 F12P00748 615 aaPredicted RBP16.77■□□□□ 0.28
COL11A2-204ENST00000395194 TFPTP0C1Z6 253 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 PDLIM4P50479 330 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 UBE2NP61088 152 aaKnown RBP16.77■□□□□ 0.28
COL11A2-204ENST00000395194 SNRPD2P62316 118 aaKnown RBP16.77■□□□□ 0.28
COL11A2-204ENST00000395194 LSM11P83369 360 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL11A2-204ENST00000395194 SRSF2Q01130 221 aaKnown RBP16.77■□□□□ 0.28
COL11A2-204ENST00000395194 LARS2Q15031 903 aaKnown RBP16.77■□□□□ 0.28
COL11A2-204ENST00000395194 SLC9B1Q4ZJI4 515 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 PDCD4Q53EL6 469 aaKnown RBP16.77■□□□□ 0.28
COL11A2-204ENST00000395194 C6orf10Q5SRN2 563 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 CREB3L2Q70SY1 520 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 SLC46A3Q7Z3Q1 461 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 EPHX4Q8IUS5 362 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 GLB1L3Q8NCI6 653 aaPredicted RBP16.77■□□□□ 0.28
COL11A2-204ENST00000395194 SHARPINQ9H0F6 387 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 SEC14L4Q9UDX3 406 aa16.77■□□□□ 0.28
COL11A2-204ENST00000395194 TMEM120BA0PK00 339 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 TMEM229AB2RXF0 380 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 LMX1BO60663 402 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 SLC22A3O75751 556 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 AHSA1O95433 338 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 IL6P05231 212 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 NUDT7P0C024 238 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 IGFBP5P24593 272 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 RPS5P46782 204 aaKnown RBP16.76■□□□□ 0.27
COL11A2-204ENST00000395194 CLDN17P56750 224 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 RNF220Q5VTB9 566 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 PIMREGQ9BSJ6 248 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 CACYBPQ9HB71 228 aaKnown RBP16.76■□□□□ 0.27
COL11A2-204ENST00000395194 CA10Q9NS85 328 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 THAP1Q9NVV9 213 aa16.76■□□□□ 0.27
COL11A2-204ENST00000395194 SLC35F4A4IF30 521 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 SNNO75324 88 aaPredicted RBP16.75■□□□□ 0.27
COL11A2-204ENST00000395194 CRYAAP02489 173 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 CELA3BP08861 270 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 CECR9P0C854 216 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 PNMTP11086 282 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 IDO1P14902 403 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 CALCRP30988 508 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 SERPINF1P36955 418 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 ZNF311Q5JNZ3 666 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 MAVSQ7Z434 540 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 MYPOPQ86VE0 399 aaPredicted RBP16.75■□□□□ 0.27
COL11A2-204ENST00000395194 BCL2L2Q92843 193 aaPredicted RBP16.75■□□□□ 0.27
COL11A2-204ENST00000395194 MAL2Q969L2 176 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 ITCHQ96J02 903 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 OR52B2Q96RD2 323 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 PRR14Q9BWN1 585 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 SPATA9Q9BWV2 254 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 NELFAQ9H3P2 528 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 PIF1Q9H611 641 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 OBP2BQ9NPH6 170 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 RASD1Q9Y272 281 aa16.75■□□□□ 0.27
COL11A2-204ENST00000395194 IGHV4-61A0A0C4DH41 118 aa16.74■□□□□ 0.27
COL11A2-204ENST00000395194 TMEM247A6NEH6 219 aa16.74■□□□□ 0.27
COL11A2-204ENST00000395194 VWC2LB2RUY7 222 aa16.74■□□□□ 0.27
COL11A2-204ENST00000395194 NPIPB7O75200 414 aa16.74■□□□□ 0.27
COL11A2-204ENST00000395194 VAMP5O95183 116 aa16.74■□□□□ 0.27
COL11A2-204ENST00000395194 OR4A8P0C604 315 aa16.74■□□□□ 0.27
COL11A2-204ENST00000395194 APEHP13798 732 aaKnown RBP16.74■□□□□ 0.27
COL11A2-204ENST00000395194 GTF2E2P29084 291 aaKnown RBP16.74■□□□□ 0.27
COL11A2-204ENST00000395194 NR4A2P43354 598 aa16.74■□□□□ 0.27
COL11A2-204ENST00000395194 ROR2Q01974 943 aaKnown RBP16.74■□□□□ 0.27
COL11A2-204ENST00000395194 NAAAQ02083 359 aa16.74■□□□□ 0.27
COL11A2-204ENST00000395194 EGR4Q05215 589 aa16.74■□□□□ 0.27
COL11A2-204ENST00000395194 KTI12Q96EK9 354 aaPredicted RBP16.74■□□□□ 0.27
COL11A2-204ENST00000395194 FOXN4Q96NZ1 517 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms