RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 IMPA2O14732 288 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 OR2F2O95006 317 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 MNDAP41218 407 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 NTHL1P78549 312 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 HTRA4P83105 476 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 OR2F1Q13607 317 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF311Q5JNZ3 666 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 RAB12Q6IQ22 244 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 DNM1P46Q6ZS02 220 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 Q6ZVU0 165 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 GJD3Q8N144 294 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 KREMEN2Q8NCW0 462 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 SUN3Q8TAQ9 357 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 EXOSC8Q96B26 276 aaKnown RBP13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 ARHGDIGQ99819 225 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 VRK1Q99986 396 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 SEC11CQ9BY50 192 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 EGLN1Q9GZT9 426 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 ADGRL4Q9HBW9 690 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 TNFSF18Q9UNG2 199 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 NTNG1Q9Y2I2 539 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 OR2AG2A6NM03 316 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 FGF16O43320 207 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 LILRB3O75022 631 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 IGSF6O95976 241 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 PRG2P13727 222 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF44P15621 663 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 CDK2P24941 298 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 CAPZA1P52907 286 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 ALKBH2Q6NS38 261 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 PWWP2BQ6NUJ5 590 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 MBOAT2Q6ZWT7 520 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 SSX6Q7RTT6 188 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 OR2AP1Q8NGE2 309 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 OR4C16Q8NGL9 310 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 SYNPRQ8TBG9 265 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 PMM1Q92871 262 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 PPP1R16AQ96I34 528 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 CNTNAP3BQ96NU0 1288 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 CHST6Q9GZX3 395 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 DYRK1BQ9Y463 629 aa13.48□□□□□ -0.25
VPS9D1-201ENST00000389386 NOTCH4Q99466 2003 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 DENND4CQ5VZ89 1909 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 SLC22A31A6NKX4 558 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 C1orf196B1AJZ1 125 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 OR2T1O43869 369 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 THY1P04216 161 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 IL9P15248 144 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 CLDN12P56749 244 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 ACTR1AP61163 376 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 TEAD2Q15562 447 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 GLT8D1Q68CQ7 371 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 ZCCHC12Q6PEW1 402 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 OR6N1Q8NGY5 312 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 ZBP1Q9H171 429 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 RTCAO00442 366 aaKnown RBP13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 CD8AP01732 235 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 RNF224P0DH78 156 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 SRMP19623 302 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 GPX4P36969 197 aaPredicted RBP13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 SLC16A1P53985 500 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 TAS2R20P59543 309 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF425Q6IV72 752 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 PSRC1Q6PGN9 363 aaPredicted RBP13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 BEND4Q6ZU67 534 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 LSRQ86X29 649 aaPredicted RBP13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 BEST3Q8N1M1 668 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 ZSCAN1Q8NBB4 408 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 DUSP19Q8WTR2 217 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 TMEM255BQ8WV15 326 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 SMIM19Q96E16 107 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 MNTQ99583 582 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 C1QTNF2Q9BXJ5 285 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 OR51V1Q9H2C8 321 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 IL21RQ9HBE5 538 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 ACKR4Q9NPB9 350 aa13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 METTL1Q9UBP6 276 aaKnown RBP13.47□□□□□ -0.25
VPS9D1-201ENST00000389386 OR5H14A6NHG9 310 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 PLPP1O14494 284 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 RAB40ALP0C0E4 278 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 SERPINA4P29622 427 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 FAUP35544 74 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 PPM1AP35813 382 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 SPINT3P49223 89 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 FXYD6P3P58550 94 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 CDK5R1Q15078 307 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 PLEKHN1Q494U1 663 aaPredicted RBP13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 BEX5Q5H9J7 111 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 NXPE4Q6UWF7 544 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 UNQ9370/PRO34162Q6UXP9 181 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 KRT77Q7Z794 578 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 OR1J4Q8NGS1 313 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 FIBINQ8TAL6 211 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 CYB5D2Q8WUJ1 264 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 RAB40AQ8WXH6 277 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 HAVCR1Q96D42 359 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 ZG16BQ96DA0 208 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 TCF7L1Q9HCS4 588 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 POT1Q9NUX5 634 aa13.46□□□□□ -0.25
VPS9D1-201ENST00000389386 OR5V1Q9UGF6 321 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms