RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 TRAV27A0A087WT01 109 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 A0A1W2PPK0 400 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 SPDEFO95238 335 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 APOC1P02654 83 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 GABRA1P14867 456 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 C4BPBP20851 252 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 MST1P26927 711 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 TLX1P31314 330 aaPredicted RBP12.71□□□□□ -0.37
SF1-205ENST00000377394 OR12D2P58182 307 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 DHODHQ02127 395 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 TRAM1Q15629 374 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 AMZ1Q400G9 498 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 FCRL6Q6DN72 434 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 FAAP20Q6NZ36 180 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 OR1E3Q8WZA6 343 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 OR1F2PQ96R84 312 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 DUSP22Q9NRW4 184 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 SLC6A5Q9Y345 797 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 MRPS2Q9Y399 296 aaKnown RBP12.71□□□□□ -0.37
SF1-205ENST00000377394 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 A0A0C4DFX4 3053 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 TRBV23OR9-2A0A075B6M9 112 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 TBC1D3EA0A087X179 549 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 POM121BA6NF01 834 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 ZNF860A6NHJ4 632 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 MPTX1A8MV57 137 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 J3QLW9 94 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 TNFSF14O43557 240 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 GALR3O60755 368 aaPredicted RBP12.71□□□□□ -0.37
SF1-205ENST00000377394 LDB3O75112 727 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 ZNF19P17023 458 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 MAP3K8P41279 467 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 SLC16A1P53985 500 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 ADPRHP54922 357 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 SEC13P55735 322 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 PSMA6P60900 246 aaKnown RBP12.71□□□□□ -0.37
SF1-205ENST00000377394 MC2RQ01718 297 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 CRMP1Q14194 572 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 FAM74A1Q5RGS3 127 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 DMKNQ6E0U4 476 aaPredicted RBP12.71□□□□□ -0.37
SF1-205ENST00000377394 FIGNL1Q6PIW4 674 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 MCATQ8IVS2 390 aaKnown RBP12.71□□□□□ -0.37
SF1-205ENST00000377394 COX18Q8N8Q8 333 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 TMEM52Q8NDY8 209 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 CCL4L1Q8NHW4 92 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 NARS2Q96I59 477 aaKnown RBP12.71□□□□□ -0.37
SF1-205ENST00000377394 ADAT1Q9BUB4 502 aaKnown RBP12.71□□□□□ -0.37
SF1-205ENST00000377394 TWSG1Q9GZX9 223 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 PRDM9Q9NQV7 894 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 PLCL2Q9UPR0 1127 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 RCE1Q9Y256 329 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 MED31Q9Y3C7 131 aa12.71□□□□□ -0.37
SF1-205ENST00000377394 FXYD6-FXYD2A0A087WZ82 144 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 LRRC72A6NJI9 287 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 OR6C65A6NJZ3 312 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 FGF17O60258 216 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 RLN2P04090 185 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 ATP1B1P05026 303 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 SAGP10523 405 aaPredicted RBP12.71□□□□□ -0.38
SF1-205ENST00000377394 ANXA7P20073 488 aaKnown RBP12.71□□□□□ -0.38
SF1-205ENST00000377394 RAB3BP20337 219 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 ACVR1BP36896 505 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 GDNFP39905 211 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 RAG2P55895 527 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 HFEQ30201 348 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 SSX6Q7RTT6 188 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 CDRT4Q8N9R6 151 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 CYB561A3Q8NBI2 242 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 OR5J2Q8NH18 312 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 OR51A7Q8NH64 312 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 SLC22A8Q8TCC7 542 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 PHOSPHO2Q8TCD6 241 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 C2CD4CQ8TF44 421 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 SMPDL3BQ92485 455 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 PEX11GQ96HA9 241 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 STACQ99469 402 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 SLC19A3Q9BZV2 496 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 FXYD6Q9H0Q3 95 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 PILRAQ9UKJ1 303 aa12.71□□□□□ -0.38
SF1-205ENST00000377394 A0A087WV62 115 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 KIR2DL1P43626 348 aaPredicted RBP12.7□□□□□ -0.38
SF1-205ENST00000377394 FNTBP49356 437 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 TAS2R43P59537 309 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 SEC61A1P61619 476 aaKnown RBP12.7□□□□□ -0.38
SF1-205ENST00000377394 PPP2CBP62714 309 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 PPP2CAP67775 309 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 MGAT2Q10469 447 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 ZNF660Q6AZW8 331 aaPredicted RBP12.7□□□□□ -0.38
SF1-205ENST00000377394 ZNF613Q6PF04 617 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 PRSS41Q7RTY9 318 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 ZAR1Q86SH2 424 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 SLITRK4Q8IW52 837 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 CMIPQ8IY22 773 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 CDK20Q8IZL9 346 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 BPIFCQ8NFQ6 507 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 OR5T2Q8NGG2 359 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 OR4D10Q8NGI6 311 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 OR52B4Q8NGK2 314 aa12.7□□□□□ -0.38
SF1-205ENST00000377394 OR13C5Q8NGS8 318 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms