RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 SPATA9Q9BWV2 254 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 TAS2R16Q9NYV7 291 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 SLAMF8Q9P0V8 285 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 MGAT4BQ9UQ53 548 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 IFT52Q9Y366 437 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 FLVCR1Q9Y5Y0 555 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 M0R1B8 84 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 KRT33AO76009 404 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 GTF2E2P29084 291 aaKnown RBP16.79■□□□□ 0.28
CBWD3-204ENST00000377349 SLC25A3Q00325 362 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 LOXL1Q08397 574 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-204ENST00000377349 FADDQ13158 208 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 CHRFAM7AQ494W8 412 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 SLC22A25Q6T423 547 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 PAQR6Q6TCH4 344 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 HDXQ7Z353 690 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 MUC15Q8N387 334 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 ZNF525Q8N782 197 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 SLC25A36Q96CQ1 311 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 ADAD1Q96M93 576 aaKnown RBP16.79■□□□□ 0.28
CBWD3-204ENST00000377349 TNFRSF13CQ96RJ3 184 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 CCDC28BQ9BUN5 200 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 ADAM19Q9H013 955 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 A4GALTQ9NPC4 353 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 ARGLU1Q9NWB6 273 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-204ENST00000377349 PARPBPQ9NWS1 579 aa16.79■□□□□ 0.28
CBWD3-204ENST00000377349 LIPT2A6NK58 231 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 A8MVM7 634 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 H7C417 338 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 IFNA2P01563 188 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 VLDLRP98155 873 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 IL1RL1Q01638 556 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 PAGE3Q5JUK9 113 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 C1orf140Q5VVS0 124 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 TMEM225Q6GV28 225 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 BLOC1S3Q6QNY0 202 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 AAED1Q7RTV5 226 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 FUNDC1Q8IVP5 155 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 OR9K2Q8NGE7 335 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 SLC25A37Q9NYZ2 338 aa16.78■□□□□ 0.28
CBWD3-204ENST00000377349 AQP1P29972 269 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 MAP2K6P52564 334 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 NCALDP61601 193 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 SQLEQ14534 574 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 SLC17A1Q14916 467 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 TSPO2Q5TGU0 170 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 PRAMEF8Q5VWM4 474 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 PRAMEF7Q5VXH5 474 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 KLHL17Q6TDP4 642 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 CLEC2AQ6UVW9 174 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 MSRB3Q8IXL7 192 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 NANOS1Q8WY41 292 aaKnown RBP16.77■□□□□ 0.27
CBWD3-204ENST00000377349 C3orf49Q96BT1 292 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 SLC7A10Q9NS82 523 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 VAPAQ9P0L0 249 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 DCTN4Q9UJW0 460 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 CHST2Q9Y4C5 530 aa16.77■□□□□ 0.27
CBWD3-204ENST00000377349 HMGB1P1B2RPK0 211 aaPredicted RBP16.76■□□□□ 0.27
CBWD3-204ENST00000377349 AHSA1O95433 338 aa16.76■□□□□ 0.27
CBWD3-204ENST00000377349 FAM157CP0CG43 387 aa16.76■□□□□ 0.27
CBWD3-204ENST00000377349 RPS5P46782 204 aaKnown RBP16.76■□□□□ 0.27
CBWD3-204ENST00000377349 DSCR9P59020 149 aa16.76■□□□□ 0.27
CBWD3-204ENST00000377349 ZSWIM7Q19AV6 140 aa16.76■□□□□ 0.27
CBWD3-204ENST00000377349 ZNF544Q6NX49 715 aa16.76■□□□□ 0.27
CBWD3-204ENST00000377349 KRT73Q86Y46 540 aa16.76■□□□□ 0.27
CBWD3-204ENST00000377349 FBXL14Q8N1E6 418 aa16.76■□□□□ 0.27
CBWD3-204ENST00000377349 ZNF385AQ96PM9 386 aaKnown RBP16.76■□□□□ 0.27
CBWD3-204ENST00000377349 NPHS2Q9NP85 383 aa16.76■□□□□ 0.27
CBWD3-204ENST00000377349 SLC13A4Q9UKG4 626 aa16.76■□□□□ 0.27
CBWD3-204ENST00000377349 AQP7P3A6NL99 342 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 EVPLLA8MZ36 301 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 PHF1O43189 567 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-204ENST00000377349 PPIBP23284 216 aaKnown RBP16.75■□□□□ 0.27
CBWD3-204ENST00000377349 FABP6P51161 128 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 CDK6Q00534 326 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 RAB35Q15286 201 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 LRIF1Q5T3J3 769 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 OR7E24Q6IFN5 339 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 KLHL24Q6TFL4 600 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 C10orf111Q8N326 155 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 C10orf105Q8TEF2 133 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 SLC17A5Q9NRA2 495 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 TMEM160Q9NX00 188 aa16.75■□□□□ 0.27
CBWD3-204ENST00000377349 LY6HO94772 140 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 ARAFP10398 606 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 SLC25A16P16260 332 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 HOXB9P17482 250 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-204ENST00000377349 CBLP22681 906 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 SLC6A2P23975 617 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 TGFBR3Q03167 851 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 SCARB2Q14108 478 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 REEP3Q6NUK4 255 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 KDM8Q8N371 416 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 C1orf162Q8NEQ5 155 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-204ENST00000377349 TMEM158Q8WZ71 300 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 ALKBH3Q96Q83 286 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-204ENST00000377349 PRR14Q9BWN1 585 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 IKZF5Q9H5V7 419 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 BCL2L10Q9HD36 194 aa16.74■□□□□ 0.27
CBWD3-204ENST00000377349 CDC42EP3Q9UKI2 254 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms