RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MDFIQ99750 246 aa18.43■□□□□ 0.54
VSX1-201ENST00000376707 SLC25A37Q9NYZ2 338 aa18.43■□□□□ 0.54
VSX1-201ENST00000376707 IFT52Q9Y366 437 aa18.43■□□□□ 0.54
VSX1-201ENST00000376707 HMGB1P1B2RPK0 211 aaPredicted RBP18.42■□□□□ 0.54
VSX1-201ENST00000376707 FRS3O43559 492 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 TLX2O43763 284 aaPredicted RBP18.42■□□□□ 0.54
VSX1-201ENST00000376707 CD5LO43866 347 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 VAMP5O95183 116 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 NUDT7P0C024 238 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 BMP4P12644 408 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 AQP5P55064 265 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 ZNF311Q5JNZ3 666 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 SERPINA11Q86U17 422 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 MSRB3Q8IXL7 192 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 STON2Q8WXE9 905 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 SLC35B4Q969S0 331 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 C3orf49Q96BT1 292 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 SPDL1Q96EA4 605 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 VIPAS39Q9H9C1 493 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 YAE1D1Q9NRH1 226 aa18.42■□□□□ 0.54
VSX1-201ENST00000376707 IGHV4-30-2A0A087WSY4 118 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 AHSA1O95433 338 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 ATP4BP51164 291 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 DSCR9P59020 149 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 CHRNB3Q05901 458 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 HIKESHIQ53FT3 197 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 HDXQ7Z353 690 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 STK35Q8TDR2 534 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 DYDC1Q8WWB3 177 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 HTRA1Q92743 480 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 MAL2Q969L2 176 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 CCDC167Q9P0B6 97 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 SLAMF8Q9P0V8 285 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 DNHD1Q96M86 4753 aa18.41■□□□□ 0.54
VSX1-201ENST00000376707 C5orf58C9J3I9 102 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 ZNF587BE7ETH6 402 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 ATP6V1G2-DDX39BF2Z307 99 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 H7C417 338 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 ETS2P15036 469 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 P2RY4P51582 365 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 CREB3L2Q70SY1 520 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 OR10H5Q8NGA6 315 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 BBS10Q8TAM1 723 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 OBP2BQ9NPH6 170 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 INTS9Q9NV88 658 aaKnown RBP18.4■□□□□ 0.54
VSX1-201ENST00000376707 MOKQ9UQ07 419 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 RASD1Q9Y272 281 aa18.4■□□□□ 0.54
VSX1-201ENST00000376707 TRBV5-3A0A0A0MS03 114 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 OR6C65A6NJZ3 312 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 TMEM229AB2RXF0 380 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 NR5A2O00482 541 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 NPIPB7O75200 414 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 H2AFXP16104 143 aaPredicted RBP18.39■□□□□ 0.53
VSX1-201ENST00000376707 PPIBP23284 216 aaKnown RBP18.39■□□□□ 0.53
VSX1-201ENST00000376707 GTF2E2P29084 291 aaKnown RBP18.39■□□□□ 0.53
VSX1-201ENST00000376707 APOBEC3AP31941 199 aaPredicted RBP18.39■□□□□ 0.53
VSX1-201ENST00000376707 SELENOPP49908 381 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 HOXC5Q00444 222 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 PAGE3Q5JUK9 113 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 NIPAL3Q6P499 406 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 CKAP2Q8WWK9 683 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 SLC25A36Q96CQ1 311 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 RPS6KB2Q9UBS0 482 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 PMF1-BGLAPU3KQ54 211 aa18.39■□□□□ 0.53
VSX1-201ENST00000376707 ELOA3DA6NLF2 546 aaPredicted RBP18.38■□□□□ 0.53
VSX1-201ENST00000376707 LGI1O95970 557 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 ARAFP10398 606 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 UBE2NP61088 152 aaKnown RBP18.38■□□□□ 0.53
VSX1-201ENST00000376707 LGALS3BPQ08380 585 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 SQLEQ14534 574 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 ELOA3BQ3SY89 546 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 TBRG1Q3YBR2 411 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 C10orf111Q8N326 155 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 ZNF525Q8N782 197 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 ELOA3Q8NG57 546 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 OR1K1Q8NGR3 316 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 MFSD8Q8NHS3 518 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 BOD1Q96IK1 185 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 MAGEB18Q96M61 343 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 ALKBH3Q96Q83 286 aaPredicted RBP18.38■□□□□ 0.53
VSX1-201ENST00000376707 KCNS3Q9BQ31 491 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 VAPAQ9P0L0 249 aa18.38■□□□□ 0.53
VSX1-201ENST00000376707 GPRIN2O60269 458 aa18.37■□□□□ 0.53
VSX1-201ENST00000376707 PNMTP11086 282 aa18.37■□□□□ 0.53
VSX1-201ENST00000376707 PRKAR1BP31321 381 aa18.37■□□□□ 0.53
VSX1-201ENST00000376707 RPS5P46782 204 aaKnown RBP18.37■□□□□ 0.53
VSX1-201ENST00000376707 AGKQ53H12 422 aa18.37■□□□□ 0.53
VSX1-201ENST00000376707 GCNT6Q5T4J0 391 aa18.37■□□□□ 0.53
VSX1-201ENST00000376707 EPHX4Q8IUS5 362 aa18.37■□□□□ 0.53
VSX1-201ENST00000376707 FAM168AQ92567 244 aa18.37■□□□□ 0.53
VSX1-201ENST00000376707 RSPO3Q9BXY4 272 aaPredicted RBP18.37■□□□□ 0.53
VSX1-201ENST00000376707 RABEP2Q9H5N1 569 aa18.37■□□□□ 0.53
VSX1-201ENST00000376707 ARGLU1Q9NWB6 273 aaPredicted RBP18.37■□□□□ 0.53
VSX1-201ENST00000376707 CR1P17927 2039 aa18.37■□□□□ 0.53
VSX1-201ENST00000376707 A0A096LNT2 108 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 IGHV1-18A0A0C4DH31 117 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 A8MV72 311 aaPredicted RBP18.36■□□□□ 0.53
VSX1-201ENST00000376707 FTCDNL1E5RQL4 147 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 SLC25A16P16260 332 aa18.36■□□□□ 0.53
VSX1-201ENST00000376707 GPX2P18283 190 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms