RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 LTC4SQ16873 150 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 KDM8Q8N371 416 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 C7orf43Q8WVR3 580 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 DCAF13Q9NV06 445 aaKnown RBP11.65□□□□□ -0.54
VPS13A-204ENST00000376634 CBLCQ9ULV8 474 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 A0A1W2PQ09 198 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 LRIT2A6NDA9 550 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 MCRIP1C9JLW8 97 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 PRICKLE3O43900 615 aaPredicted RBP11.65□□□□□ -0.54
VPS13A-204ENST00000376634 LTB4RQ15722 352 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 DTWD1Q8N5C7 304 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 ABHD11Q8NFV4 315 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 SGPP1Q9BX95 441 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 KRBA1A5PL33 1030 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 TRAF3IP2O43734 574 aaPredicted RBP11.65□□□□□ -0.54
VPS13A-204ENST00000376634 FABP1P07148 127 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 IQCF3P0C7M6 154 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 IDUAP35475 653 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 HTR5AP47898 357 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 CAMK2BQ13554 666 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 SLC36A2Q495M3 483 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 C6orf89Q6UWU4 347 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 MOB3CQ70IA8 216 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 FAM58AQ8N1B3 248 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 ADAMTS16Q8TE57 1224 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 AGPAT4Q9NRZ5 378 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 ERVPABLB-1P60509 514 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 SLC9A3R2Q15599 337 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 NAGSQ8N159 534 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 OR2M2Q96R28 347 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 PSD2Q9BQI7 771 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 NPFFR2Q9Y5X5 522 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 TMEM269A0A1B0GVZ9 245 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 MRPL33O75394 65 aaKnown RBP11.65□□□□□ -0.54
VPS13A-204ENST00000376634 FOLR1P15328 257 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 GABRA5P31644 462 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 FAM74A1Q5RGS3 127 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 SECTM1Q8WVN6 248 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 FAM173AQ9BQD7 235 aa11.65□□□□□ -0.54
VPS13A-204ENST00000376634 MEIOCA2RUB1 952 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 KDM4EB2RXH2 506 aaPredicted RBP11.65□□□□□ -0.55
VPS13A-204ENST00000376634 PRAMEF4O60810 478 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 MITFO75030 526 aaPredicted RBP11.65□□□□□ -0.55
VPS13A-204ENST00000376634 OR10J4P0C629 311 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 PPP3CBP16298 524 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 CD70P32970 193 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 RUNX3Q13761 415 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 PDE7AQ13946 482 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 MBTPS1Q14703 1052 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 SLC35G1Q2M3R5 365 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 OR10K2Q6IF99 312 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 APIPQ96GX9 242 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 SLC12A9Q9BXP2 914 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 ANKRD60Q9BZ19 345 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 ZDHHC7Q9NXF8 308 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 PRELID3BQ9Y3B1 194 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 EMC9Q9Y3B6 208 aa11.65□□□□□ -0.55
VPS13A-204ENST00000376634 GPR32O75388 356 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 FBXO24O75426 580 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 NFYBP25208 207 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 C18orf21Q32NC0 220 aaPredicted RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 MCATQ8IVS2 390 aaKnown RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 FAM213BQ8TBF2 198 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 QRSL1Q9H0R6 528 aaKnown RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 HSD3B7Q9H2F3 369 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 KIR2DS5A0A0G2JLQ3 304 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 A0A0G2JNG1 304 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 KIR2DS3K7RE56 304 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 VASPP50552 380 aaPredicted RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 EMP2P54851 167 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 HES1Q14469 280 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 KIR2DS5Q14953 304 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 PHYHD1Q5SRE7 291 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 AVPI1Q5T686 147 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 OR5M10Q6IEU7 315 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 MEX3DQ86XN8 651 aaKnown RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 PURGQ9UJV8 347 aaKnown RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM82A0PJX8 343 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 ZFAND5O76080 213 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 OR8U8P0C7N1 319 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 SLC35A2P78381 396 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 C4orf17Q53FE4 359 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 LIPIQ6XZB0 460 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 GAREM2Q75VX8 874 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 DNAJC15Q9Y5T4 150 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 K7ERQ8 282 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 SSTR2P30874 369 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 EBPQ15125 230 aaKnown RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 ACOT4Q8N9L9 421 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 RHBDD1Q8TEB9 315 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 CDCA3Q99618 268 aaPredicted RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 WASH6PQ9NQA3 447 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 INTS6Q9UL03 887 aaKnown RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 LAMB2P55268 1798 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 IGHEP01854 428 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 M6PRP20645 277 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM135Q86UB9 458 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 LACC1Q8IV20 430 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 UQCC2Q9BRT2 126 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 IGSF5Q9NSI5 407 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms