RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TAF13Q15543 124 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 TPGS2Q68CL5 300 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 NXPE4Q6UWF7 544 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 LRRTM1Q86UE6 522 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 GLB1L2Q8IW92 636 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 NR4A3Q92570 626 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 MRPL38Q96DV4 380 aaKnown RBP18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 ARHGDIGQ99819 225 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 C1QTNF2Q9BXJ5 285 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 DPH1Q9BZG8 443 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 ZCCHC2Q9C0B9 1178 aaKnown RBP18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 APMAPQ9HDC9 416 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 ACKR4Q9NPB9 350 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 ZNF705EA8MWA4 302 aaPredicted RBP18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 BHLHE40O14503 412 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 TEAD1P28347 426 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 FAUP35544 74 aaKnown RBP18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 FRKP42685 505 aaPredicted RBP18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 PGDP52209 483 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 LMAN2Q12907 356 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 ZNF345Q14585 488 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 KRT77Q7Z794 578 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 OR1J4Q8NGS1 313 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 OR6N1Q8NGY5 312 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 CD99L2Q8TCZ2 262 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 HAVCR1Q96D42 359 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 PELI1Q96FA3 418 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 F2RL3Q96RI0 385 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 SDHAF3Q9NRP4 125 aa18.91■□□□□ 0.62
TMEFF1-201ENST00000374879 ACOD1A6NK06 481 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 IMPA2O14732 288 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 FGF16O43320 207 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 MUC1P15941 1255 aaPredicted RBP18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 MNDAP41218 407 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 LASP1Q14847 261 aaKnown RBP18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 ZNF425Q6IV72 752 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 DCUN1D3Q8IWE4 304 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 CYB561A3Q8NBI2 242 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 OR2AP1Q8NGE2 309 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 SLC41A3Q96GZ6 507 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 EXO5Q9H790 373 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 KLF15Q9UIH9 416 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 PLEKHA6Q9Y2H5 1048 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 F5H0A9 414 aaPredicted RBP18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 RBBP9O75884 186 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 TBX6O95947 436 aaPredicted RBP18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 CD70P32970 193 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 ST8SIA6P61647 398 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 GTPBP8Q8N3Z3 284 aaPredicted RBP18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 C14orf79Q96F83 325 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 MAP3K3Q99759 626 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 NAA11Q9BSU3 229 aaPredicted RBP18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 GLIPR2Q9H4G4 154 aa18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 MRPS30Q9NP92 439 aaKnown RBP18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 METTL1Q9UBP6 276 aaKnown RBP18.9■□□□□ 0.62
TMEFF1-201ENST00000374879 TRBV2A0A0J9YWF9 115 aa18.89■□□□□ 0.62
TMEFF1-201ENST00000374879 WASH3PC4AMC7 463 aa18.89■□□□□ 0.62
TMEFF1-201ENST00000374879 PBLDP30039 288 aaPredicted RBP18.89■□□□□ 0.62
TMEFF1-201ENST00000374879 DLSTP36957 453 aa18.89■□□□□ 0.62
TMEFF1-201ENST00000374879 C11orf87Q6NUJ2 197 aa18.89■□□□□ 0.62
TMEFF1-201ENST00000374879 ARL14Q8N4G2 192 aa18.89■□□□□ 0.62
TMEFF1-201ENST00000374879 ASB13Q8WXK3 278 aa18.89■□□□□ 0.62
TMEFF1-201ENST00000374879 ARL11Q969Q4 196 aa18.89■□□□□ 0.62
TMEFF1-201ENST00000374879 TMEM41AQ96HV5 264 aa18.89■□□□□ 0.62
TMEFF1-201ENST00000374879 FAM96BQ9Y3D0 163 aa18.89■□□□□ 0.62
TMEFF1-201ENST00000374879 CD8AP01732 235 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 FGBP02675 491 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 GJD3Q8N144 294 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 STEAP2Q8NFT2 490 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 PHOSPHO2Q8TCD6 241 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 C16orf58Q96GQ5 468 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 MCHR1Q99705 422 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 POFUT1Q9H488 388 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 SYNPO2LQ9H987 977 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 TCF7L1Q9HCS4 588 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 MEPEQ9NQ76 525 aaPredicted RBP18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 SCN5AQ14524 2016 aa18.89■□□□□ 0.61
TMEFF1-201ENST00000374879 UNC119BA6NIH7 251 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 GPR37O15354 613 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 PPP1R3DO95685 299 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 RAB40ALP0C0E4 278 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 APEHP13798 732 aaKnown RBP18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 ITPKBP27987 946 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 SDHAP31040 664 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 KHKP50053 298 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 P2RY4P51582 365 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 EPHB3P54753 998 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 SIRPAP78324 504 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 PLA2G7Q13093 441 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 AGERQ15109 404 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 ETV3LQ6ZN32 361 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 C2orf73Q8N5S3 287 aaPredicted RBP18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 RAB40AQ8WXH6 277 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 EGLN1Q9GZT9 426 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 SLC7A7Q9UM01 511 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 DMRT1Q9Y5R6 373 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 A0A1B0GV90 55 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 MEIS3P1A6NDR6 274 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 LRRC72A6NJI9 287 aa18.88■□□□□ 0.61
TMEFF1-201ENST00000374879 OR2AT4A6NND4 320 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms