RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 ZNF836Q6ZNA1 936 aa11.33□□□□□ -0.6
CTNNB1-201ENST00000349496 SELENOHQ8IZQ5 122 aaKnown RBP11.33□□□□□ -0.6
CTNNB1-201ENST00000349496 FRMD1Q8N878 549 aa11.33□□□□□ -0.6
CTNNB1-201ENST00000349496 AQP11Q8NBQ7 271 aa11.33□□□□□ -0.6
CTNNB1-201ENST00000349496 OR5M3Q8NGP4 307 aa11.33□□□□□ -0.6
CTNNB1-201ENST00000349496 RTP4Q96DX8 246 aa11.33□□□□□ -0.6
CTNNB1-201ENST00000349496 IGSF21Q96ID5 467 aa11.33□□□□□ -0.6
CTNNB1-201ENST00000349496 SFXN1Q9H9B4 322 aa11.33□□□□□ -0.6
CTNNB1-201ENST00000349496 SEPSECSQ9HD40 501 aaKnown RBP11.33□□□□□ -0.6
CTNNB1-201ENST00000349496 MAP4K5Q9Y4K4 846 aa11.33□□□□□ -0.6
CTNNB1-201ENST00000349496 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 HCRTR2O43614 444 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 DCDP81605 110 aaKnown RBP11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 FABP5Q01469 135 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 PJVKQ0ZLH3 352 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 HEPACAMQ14CZ8 416 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 CEACAM20Q6UY09 585 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 OR8U1Q8NH10 309 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 TMEM159Q96B96 161 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 RNF122Q9H9V4 155 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 EXOSC3Q9NQT5 275 aaKnown RBP11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 COLEC10Q9Y6Z7 277 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 TBC1D3FA6NER0 549 aaPredicted RBP11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 FAM220BPB1ANY3 271 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 LRATO95237 230 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 C8GP07360 202 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 NDUFS1P28331 727 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 CTGFP29279 349 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 RBMS1P29558 406 aaKnown RBP11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 TRIM61Q5EBN2 209 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 DCAF10Q5QP82 559 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 PAQR3Q6TCH7 311 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 ESPNLQ6ZVH7 1005 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 CXXC5Q7LFL8 322 aaKnown RBP11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 TMEM135Q86UB9 458 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 IP6K3Q96PC2 410 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 NKX3-1Q99801 234 aaPredicted RBP11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 OPN4Q9UHM6 478 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 PPIL1Q9Y3C6 166 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 MRPS18CQ9Y3D5 142 aaKnown RBP11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 KPTNQ9Y664 436 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 A0A1B0GV50 99 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 CYB5BO43169 146 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 CLDN9O95484 217 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 TYMPP19971 482 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 WNT4P56705 351 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 MESTQ5EB52 335 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 PRAMEF17Q5VTA0 474 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 HSD17B11Q8NBQ5 300 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 POP5Q969H6 163 aaKnown RBP11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 SEC22AQ96IW7 307 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 NIPSNAP1Q9BPW8 284 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 MCOLN1Q9GZU1 580 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 SEC61A2Q9H9S3 476 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 RRAGCQ9HB90 399 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 RLIMQ9NVW2 624 aa11.32□□□□□ -0.6
CTNNB1-201ENST00000349496 WDR90Q96KV7 1748 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 A0A0U1RQF3 1178 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 A0A1B0GUH1 482 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 GXYLT2A0PJZ3 443 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 C22orf46C9J442 243 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 CTSSP25774 331 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 S100A10P60903 97 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 PIM3Q86V86 326 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 LRRC52Q8N7C0 313 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 MFSD8Q8NHS3 518 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 SMARCD1Q96GM5 515 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 TAPBPLQ9BX59 468 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 TMPRSS13Q9BYE2 586 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 TPSD1Q9BZJ3 242 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 RAI2Q9Y5P3 530 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 OTOFQ9HC10 1997 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 C17orf102A2RUQ5 167 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 MTX2O75431 263 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 RAB36O95755 333 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 TBPP20226 339 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 HTR2CP28335 458 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 ACSM1Q08AH1 577 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 TMEM255AQ5JRV8 349 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 TECPR1Q7Z6L1 1165 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 DYRK2Q92630 601 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 HLA-CQ95604 372 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 A0A0B4J2A0 478 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 OR52A4PA6NMU1 304 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 GPR89AB7ZAQ6 455 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 GALR3O60755 368 aaPredicted RBP11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 PTBP3O95758 552 aaKnown RBP11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 MT-ND5P03915 603 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 GPR89BP0CG08 455 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 NTSP30990 170 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 KDELR2P33947 212 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 NHLH1Q02575 133 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 PRAMEF8Q5VWM4 474 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 PRAMEF7Q5VXH5 474 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 GLT6D1Q7Z4J2 308 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 BRIX1Q8TDN6 353 aaKnown RBP11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 CDS1Q92903 461 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 PGAM5Q96HS1 289 aa11.31□□□□□ -0.6
CTNNB1-201ENST00000349496 PPP1R16AQ96I34 528 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms