RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RPS11P62280 158 aaKnown RBP eCLIP17.15■□□□□ 0.34
SCARF1-202ENST00000348987 GUCA2BQ16661 112 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 TMEM240Q5SV17 173 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 TMEM69Q5SWH9 247 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 OR4C11Q6IEV9 310 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 OVCH1Q7RTY7 1134 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 OR52L1Q8NGH7 329 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 GFI1Q99684 422 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 PELI2Q9HAT8 420 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 POT1Q9NUX5 634 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 EDARQ9UNE0 448 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 UNC119BA6NIH7 251 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 FCMRO60667 390 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 RPA2P15927 270 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 BMP7P18075 431 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 TGM3Q08188 693 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 CBFBQ13951 182 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 NUDT18Q6ZVK8 323 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 CCDC116Q8IYX3 515 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 SYNPRQ8TBG9 265 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 NR4A3Q92570 626 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 BBS4Q96RK4 519 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 TMEM138Q9NPI0 162 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 NRIP3Q9NQ35 241 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 OR10H1Q9Y4A9 318 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 NUP210Q8TEM1 1887 aaPredicted RBP17.14■□□□□ 0.33
SCARF1-202ENST00000348987 A0A0A6YYD5 115 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 LINC01553A4QN01 128 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 LRIT2A6NDA9 550 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 MAGEB1P43366 347 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 TAS2R38P59533 333 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 FOXK2Q01167 660 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 TMEM52BQ4KMG9 183 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 FAM46CQ5VWP2 391 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 TSSK4Q6SA08 328 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 MOB3CQ70IA8 216 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 ARL14Q8N4G2 192 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 NANPQ8TBE9 248 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 TNFAIP8L1Q8WVP5 186 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 WDR13Q9H1Z4 485 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 FOXJ3Q9UPW0 622 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 ATG4BQ9Y4P1 393 aa17.14■□□□□ 0.33
SCARF1-202ENST00000348987 SNRNP200O75643 2136 aaKnown RBP17.13■□□□□ 0.33
SCARF1-202ENST00000348987 TMEM272A0A1B0GTI8 110 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 SYNDIG1LA6NDD5 238 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 SPP1P10451 314 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 SRMP19623 302 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 DPP4P27487 766 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 WASP42768 502 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 UBE2IP63279 158 aaKnown RBP17.13■□□□□ 0.33
SCARF1-202ENST00000348987 KRT33BQ14525 404 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 MLC1Q15049 377 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 THSD4Q6ZMP0 1018 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 ZFP82Q8N141 532 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 SMIM19Q96E16 107 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 CNRIP1Q96F85 164 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-202ENST00000348987 S100A16Q96FQ6 103 aaKnown RBP17.13■□□□□ 0.33
SCARF1-202ENST00000348987 INSM2Q96T92 566 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-202ENST00000348987 TRMT61BQ9BVS5 477 aaKnown RBP17.13■□□□□ 0.33
SCARF1-202ENST00000348987 NOX4Q9NPH5 578 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 C20orf141Q9NUB4 165 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 SIDT1Q9NXL6 827 aaKnown RBP17.13■□□□□ 0.33
SCARF1-202ENST00000348987 IFITM5A6NNB3 132 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 EIF4E2O60573 245 aaKnown RBP17.13■□□□□ 0.33
SCARF1-202ENST00000348987 SLC35G4P0C7Q5 338 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 MAKP20794 623 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 CLDN2P57739 230 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 PPP2CBP62714 309 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 PPP2CAP67775 309 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 PRR5P85299 388 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 ARHGAP19Q14CB8 494 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 SWI5Q1ZZU3 235 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 EID2Q8N6I1 236 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 OR2A1Q8NGT9 310 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 PFN4Q8NHR9 129 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 OR7D2Q96RA2 312 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 CD180Q99467 661 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 KLHL28Q9NXS3 571 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 LHX6Q9UPM6 363 aa17.13■□□□□ 0.33
SCARF1-202ENST00000348987 OR52A4PA6NMU1 304 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 GP1BAP07359 652 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 MGMTP16455 207 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 CDK2P24941 298 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 MAPK3P27361 379 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-202ENST00000348987 RFC3P40938 356 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 MANEAQ5SRI9 462 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 SLC6A19Q695T7 634 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 OR1M1Q8NGA1 313 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 PELI1Q96FA3 418 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 CMTM3Q96MX0 182 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 SERGEFQ9UGK8 458 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 KCNK6Q9Y257 313 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 MYO15AQ9UKN7 3530 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 TRBV2A0A0J9YWF9 115 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 A0A1W2PR48 441 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 OR6C68A6NDL8 312 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 TBC1D3BA6NDS4 549 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 FAM86C2PA6NEL3 165 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 ACOD1A6NK06 481 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 MAN2B1O00754 1011 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms