RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 P3H2Q8IVL5 708 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 ZNF611Q8N823 705 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 C11orf65Q8NCR3 313 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 KBTBD8Q8NFY9 601 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 ELOA3Q8NG57 546 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 GPR32P1Q8NGA4 272 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 OR10A6Q8NH74 314 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 MFSD8Q8NHS3 518 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 TAAR8Q969N4 342 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 Q96MF0 132 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
HMGN3-202ENST00000344726 SF3B5Q9BWJ5 86 aaKnown RBP12.69□□□□□ -0.38
HMGN3-202ENST00000344726 GSX2Q9BZM3 304 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 CCDC134Q9H6E4 229 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 NANOGQ9H9S0 305 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 C12orf10Q9HB07 376 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 TAS2R16Q9NYV7 291 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 RPS6KB2Q9UBS0 482 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 RNF115Q9Y4L5 304 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 A0A0B4J2E0 115 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 A0A1B0GX12 115 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 A0A1W2PR80 420 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 PRORSD1PA6NEY8 169 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 H7C1Q1 480 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 M0QX08 132 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 M0R3H8 397 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 CLOCKO15516 846 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 AHSA1O95433 338 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 CD3EP07766 207 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 SOD3P08294 240 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 VIMP08670 466 aaKnown RBP12.68□□□□□ -0.38
HMGN3-202ENST00000344726 INHBBP09529 407 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 PNMTP11086 282 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 CRYBA2P53672 197 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 RGS8P57771 180 aaPredicted RBP12.68□□□□□ -0.38
HMGN3-202ENST00000344726 LGALS3BPQ08380 585 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 OR1Q1Q15612 314 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 TRMT5Q32P41 509 aaKnown RBP12.68□□□□□ -0.38
HMGN3-202ENST00000344726 RABL3Q5HYI8 236 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 TMEM225Q6GV28 225 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 ADAM5Q6NVV9 412 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 CREB3L2Q70SY1 520 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 EPHX4Q8IUS5 362 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 KDM8Q8N371 416 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 ANKK1Q8NFD2 765 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 OR52N5Q8NH56 324 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 SLC25A36Q96CQ1 311 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 COX4I2Q96KJ9 171 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 ARHGDIGQ99819 225 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 TRIM2Q9C040 744 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 AMBRA1Q9C0C7 1298 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 PIF1Q9H611 641 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 ESRP2Q9H6T0 727 aaKnown RBP12.68□□□□□ -0.38
HMGN3-202ENST00000344726 PARPBPQ9NWS1 579 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 TESQ9UGI8 421 aaKnown RBP12.68□□□□□ -0.38
HMGN3-202ENST00000344726 SLC25A15Q9Y619 301 aa12.68□□□□□ -0.38
HMGN3-202ENST00000344726 ANK3Q12955 4377 aaKnown RBP12.68□□□□□ -0.38
HMGN3-202ENST00000344726 CIB4A0PJX0 185 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 CCT8L1PA6NM43 557 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 ARHGEF9O43307 516 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 SERPINB7O75635 380 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 LGI1O95970 557 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 DANCRP0C864 163 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 PAX1P15863 534 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 CD247P20963 164 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 PTNP21246 168 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 PCGF2P35227 344 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 SELENOPP49908 381 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 SLC25A3Q00325 362 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 NPTX1Q15818 432 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 NRF1Q16656 503 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 ALG10BQ5I7T1 473 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 FAM91A1Q658Y4 838 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 REP15Q6BDI9 236 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 ULK3Q6PHR2 472 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 PRSS57Q6UWY2 283 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 AAED1Q7RTV5 226 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 BIVMQ86UB2 503 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 TSPYL5Q86VY4 417 aaPredicted RBP12.67□□□□□ -0.38
HMGN3-202ENST00000344726 P2RY8Q86VZ1 359 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 RBM45Q8IUH3 476 aaKnown RBP12.67□□□□□ -0.38
HMGN3-202ENST00000344726 WDR31Q8NA23 367 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 BHLHE22Q8NFJ8 381 aaPredicted RBP12.67□□□□□ -0.38
HMGN3-202ENST00000344726 OR4D11Q8NGI4 311 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 C10orf82Q8WW14 230 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 DNAJA4Q8WW22 397 aaPredicted RBP12.67□□□□□ -0.38
HMGN3-202ENST00000344726 SLC38A4Q969I6 547 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 TAMM41Q96BW9 452 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 LRRC58Q96CX6 371 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 MUCL1Q96DR8 90 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 MUS81Q96NY9 551 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 SLCO5A1Q9H2Y9 848 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 NGBQ9NPG2 151 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 ZNF701Q9NV72 531 aaPredicted RBP12.67□□□□□ -0.38
HMGN3-202ENST00000344726 B3GAT1Q9P2W7 334 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 UPB1Q9UBR1 384 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 USP22Q9UPT9 525 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 LAMP3Q9UQV4 416 aa12.67□□□□□ -0.38
HMGN3-202ENST00000344726 FN1P02751 2386 aaKnown RBP12.66□□□□□ -0.38
HMGN3-202ENST00000344726 CSPG4Q6UVK1 2322 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms