RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TRMT10AQ8TBZ6 339 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 OBP2BQ9NPH6 170 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 PMS2P1A4D2B8 440 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 J3KTA2 159 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 LPLP06858 475 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 VAMP1P23763 118 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 GAB1Q13480 694 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 DHRS4L2Q6PKH6 230 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 LAT2Q9GZY6 243 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 AMY2BP19961 511 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 BIDP55957 195 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 CNPY1Q3B7I2 92 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 DPY19L2P2Q6ZN68 376 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 H1FNTQ75WM6 255 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 PTRH1Q86Y79 214 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 GALNT16Q8N428 558 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 SDF2Q99470 211 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 C1orf198Q9H425 327 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 HHLA2Q9UM44 414 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 FRG2CA6NGY1 282 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 HOXB3P14651 431 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF454Q8N9F8 522 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 OR11L1Q8NGX0 322 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF221Q9UK13 617 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 NID1P14543 1247 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 AQP2P41181 271 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 PIGFQ07326 219 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 RUNX2Q13950 521 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 PLAG1Q6DJT9 500 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 MRI1Q9BV20 369 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 SH2B3Q9UQQ2 575 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 SMIM30A4D0T7 59 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 ELAVL4P26378 380 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 EVI2BP34910 448 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 GIPRP48546 466 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 GDF7Q7Z4P5 450 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 TTC9Q92623 222 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 C12orf43Q96C57 262 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 TBC1D24Q9ULP9 559 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 A0A087WZY1 265 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 TRBV4-1A0A0J9YWV2 114 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 PLOD2O00469 737 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 TSPAN12O95859 305 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 CDK5R2Q13319 367 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 IHHQ14623 411 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 SLC35D2Q76EJ3 337 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 ZFP41Q8N8Y5 198 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 OR7G2Q8NG99 324 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 OR5M9Q8NGP3 310 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 TMEM74BQ9NUR3 256 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 ABCD2Q9UBJ2 740 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 CHRNA9Q9UGM1 479 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 TEX51A0A1B0GUA7 166 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 TMEM269A0A1B0GVZ9 245 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF850A8MQ14 1090 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 OR7A10O76100 309 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 KCNK2O95069 426 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 SPINK2P20155 84 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 SLC1A3P43003 542 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 SELENBP1Q13228 472 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 OR1C1Q15619 314 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 LRRC18Q8N456 261 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 C16orf52Q8NHV5 167 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 PRR7Q8TB68 274 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 ABHD5Q8WTS1 349 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 ST8SIA1Q92185 356 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 TAMM41Q96BW9 452 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 SLC35A4Q96G79 324 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF845Q96IR2 970 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 TNFRSF13CQ96RJ3 184 aa15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 CNOT2Q9NZN8 540 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF806P0C7X5 589 aa15.08■□□□□ 0.01
SMARCA4-201ENST00000344626 FOXRED1Q96CU9 486 aaPredicted RBP15.08■□□□□ 0.01
SMARCA4-201ENST00000344626 RAB39BQ96DA2 213 aa15.08■□□□□ 0.01
SMARCA4-201ENST00000344626 PILRBQ9UKJ0 227 aa15.08■□□□□ 0.01
SMARCA4-201ENST00000344626 ATP1B3P54709 279 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 SLC14A1Q13336 389 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 CSRP2Q16527 193 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 C19orf48Q6RUI8 117 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 ANKRD60Q9BZ19 345 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 APMAPQ9HDC9 416 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 MAGED1Q9Y5V3 778 aaPredicted RBP15.08■□□□□ 0
SMARCA4-201ENST00000344626 LNP1A1A4G5 178 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 PRPH2P23942 346 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 RBMXP38159 391 aaKnown RBP15.08■□□□□ 0
SMARCA4-201ENST00000344626 CXCR4P61073 352 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 ZNF813Q6ZN06 617 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 FOXN4Q96NZ1 517 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 SIDT1Q9NXL6 827 aaKnown RBP15.08■□□□□ 0
SMARCA4-201ENST00000344626 KLHL13Q9P2N7 655 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 GTF2F2P13984 249 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 SLC2A5P22732 501 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 RNF4P78317 190 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 FUZQ9BT04 418 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 SLC19A3Q9BZV2 496 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 OR10A4Q9H209 315 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 NDRG3Q9UGV2 375 aa15.08■□□□□ 0
SMARCA4-201ENST00000344626 AGFG2O95081 481 aa15.07■□□□□ 0
SMARCA4-201ENST00000344626 SSPNQ14714 243 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms