RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SEMG2Q02383 582 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 FBXO46Q6PJ61 603 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 LRFN4Q6PJG9 635 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 GDF7Q7Z4P5 450 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 OR8G5Q8NG78 346 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 GLYATL1Q969I3 302 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 MCHR2Q969V1 340 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 DPH2Q9BQC3 489 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 BCORL1Q5H9F3 1711 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 AHRRA9YTQ3 701 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 FCGRTP55899 365 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ERVFC1-1P60608 527 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 SQSTM1Q13501 440 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 GLYATL3Q5SZD4 288 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 RGS7BPQ6MZT1 257 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 IPMKQ8NFU5 416 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 OR52L2PQ8NGH6 319 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 MUS81Q96NY9 551 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 CITED1Q99966 193 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 FAM221AA4D161 298 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 IQCF5A8MTL0 148 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 CXCR6O00574 342 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 PDGFBP01127 241 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 PSMB1P20618 241 aaKnown RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ISL1P61371 349 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ALKBH1Q13686 389 aaKnown RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 MBLAC2Q68D91 279 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ROBO2Q9HCK4 1378 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 OR10H2O60403 315 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ABCD3P28288 659 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 PBX3P40426 434 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 FOXK1P85037 733 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ABHD18Q0P651 414 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 CHST9Q7L1S5 443 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM173Q86WV6 379 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 PGBD5Q8N414 524 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 OR4D6Q8NGJ1 314 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF385AQ96PM9 386 aaKnown RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 NMNAT2Q9BZQ4 307 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 PIGVQ9NUD9 493 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 NDOR1Q9UHB4 597 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 HSPB2A8KAH6 182 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 CD247P20963 164 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 HSPB2Q16082 182 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 AMHR2Q16671 573 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 UBE2SQ16763 222 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 MANEALQ5VSG8 457 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 OR2M7Q8NG81 312 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 MGLLQ99685 303 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 OR14J1Q9UGF5 321 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 A0A1W2PQ09 198 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 C9orf170A2RU37 121 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MUC1P15941 1255 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PGGT1BP53609 377 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM130Q8N3G9 435 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CHST4Q8NCG5 386 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SPRYD4Q8WW59 207 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GGACTQ9BVM4 153 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM191AQ9H0A3 160 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR51I2Q9H344 312 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GPR34Q9UPC5 381 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 FRMPD1Q5SYB0 1578 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR2A4O95047 310 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ALDOCP09972 364 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR3A1P47881 315 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PRAMEF18Q5VWM3 479 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GGNBP1Q5YKI7 109 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SNX29P2Q8IUI4 249 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 FAM98AQ8NCA5 519 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR2A7Q96R45 310 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM204Q9BSN7 226 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SEMA4GQ9NTN9 838 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 DHDHQ9UQ10 334 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CORINQ9Y5Q5 1042 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PRSS47A8MTI9 375 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MFNGO00587 321 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SPINT1O43278 529 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 DSC2Q02487 901 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 RAB40BQ12829 278 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TSTQ16762 297 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CGB2Q6NT52 195 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GPR26Q8NDV2 337 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ADAD1Q96M93 576 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 JAM3Q9BX67 310 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SLC35B3Q9H1N7 401 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 METTL17Q9H7H0 456 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OSGEPQ9NPF4 335 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MYOCOSA0A1B0GUC4 107 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 EEF1E1O43324 174 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TXNP10599 105 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 DCAF4L1Q3SXM0 396 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 UBE2NLQ5JXB2 153 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 RGL4Q8IZJ4 473 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ALG3Q92685 438 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 DCAF5Q96JK2 942 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 A6NLC8 198 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 XRCC2O43543 280 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 HPNP05981 417 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GP1BAP07359 652 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CRYBB1P53674 252 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms