RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 BCAS2O75934 225 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-201ENST00000340660 IGKV1D-16P01601 117 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 UROSP10746 265 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 FDFT1P37268 417 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 ARFIP1P53367 373 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 CDKL1Q00532 357 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 ZNF155Q12901 538 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-201ENST00000340660 SELENBP1Q13228 472 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 CHIT1Q13231 466 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 E2F2Q14209 437 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 OASLQ15646 514 aaKnown RBP9.12□□□□□ -0.95
ATXN3-201ENST00000340660 TOMM34Q15785 309 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-201ENST00000340660 FXNQ16595 210 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 TSTQ16762 297 aaKnown RBP9.12□□□□□ -0.95
ATXN3-201ENST00000340660 PRUNE1Q86TP1 453 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 CCDC103Q8IW40 242 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 KLHL36Q8N4N3 616 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 SPICQ8N5J4 248 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 OR2T6Q8NHC8 308 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 HUS1BQ8NHY5 278 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 ZNF675Q8TD23 568 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 ESAMQ96AP7 390 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 CNRIP1Q96F85 164 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-201ENST00000340660 ELMOD3Q96FG2 381 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 ITCHQ96J02 903 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 ZNF681Q96N22 645 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 SERPINB12Q96P63 405 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 OSBPL8Q9BZF1 889 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 DECR2Q9NUI1 292 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 EXD2Q9NVH0 621 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 NPTNQ9Y639 398 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 DNAH2Q9P225 4427 aa9.12□□□□□ -0.95
ATXN3-201ENST00000340660 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 NPEPPSL1A6NEC2 478 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 TAPBPO15533 448 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 TPD52L2O43399 206 aaKnown RBP9.11□□□□□ -0.95
ATXN3-201ENST00000340660 SKAP2O75563 359 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-201ENST00000340660 OXSR1O95747 527 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-201ENST00000340660 CLPTM1O96005 669 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 OR12D1P0DN82 309 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 UQCRC2P22695 453 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 IRF8Q02556 426 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 HEPACAMQ14CZ8 416 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 ERCC6LQ2NKX8 1250 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 TTMPQ5BVD1 217 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 ZNF774Q6NX45 483 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 AADACL2Q6P093 401 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 MED27Q6P2C8 311 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 ETV3LQ6ZN32 361 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 NUDT13Q86X67 352 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 SPERTQ8NA61 448 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 OR4C3Q8NH37 302 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 B4GALNT2Q8NHY0 566 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 MAGEE2Q8TD90 523 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-201ENST00000340660 DNAJA3Q96EY1 480 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 MTERF1Q99551 399 aaKnown RBP9.11□□□□□ -0.95
ATXN3-201ENST00000340660 CENPKQ9BS16 269 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 TRIM15Q9C019 465 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 LAT2Q9GZY6 243 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 MYLK2Q9H1R3 596 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 ZMAT4Q9H898 229 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 MOV10Q9HCE1 1003 aaKnown RBP9.11□□□□□ -0.95
ATXN3-201ENST00000340660 BFARQ9NZS9 450 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 FBXO5Q9UKT4 447 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 FLVCR1Q9Y5Y0 555 aa9.11□□□□□ -0.95
ATXN3-201ENST00000340660 MYO1GB0I1T2 1018 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 C22orf46C9J442 243 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 TBX1O43435 398 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 ZNF35P13682 527 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 SERPINB1P30740 379 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 CD226Q15762 336 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 TBCCQ15814 346 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 TMEM155Q4W5P6 130 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 ATP6AP1LQ52LC2 224 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 TMPPEQ6ZT21 453 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 LINGO2Q7L985 606 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 FITM2Q8N6M3 262 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 IL17RDQ8NFM7 739 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 OR9A2Q8NGT5 310 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 CCDC126Q96EE4 140 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 DCLRE1CQ96SD1 692 aaKnown RBP9.1□□□□□ -0.95
ATXN3-201ENST00000340660 PCGF1Q9BSM1 259 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 SSBP3Q9BWW4 388 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-201ENST00000340660 LRCH1Q9Y2L9 728 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 CHST2Q9Y4C5 530 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 OARD1Q9Y530 152 aa9.1□□□□□ -0.95
ATXN3-201ENST00000340660 IGHV1-69DA0A0B4J2H0 117 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 BTBD17A6NE02 478 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 NCF1BA6NI72 391 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-201ENST00000340660 NCF1CA8MVU1 366 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-201ENST00000340660 SULT2B1O00204 365 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 IGHV1-69P01742 117 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 BCKDHAP12694 445 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 NCF1P14598 390 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-201ENST00000340660 ATF4P18848 351 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-201ENST00000340660 PTPN7P35236 360 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 FOXA1P55317 472 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 SLC3A1Q07837 685 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 THOC5Q13769 683 aaKnown RBP9.09□□□□□ -0.95
ATXN3-201ENST00000340660 RBMY1FQ15415 496 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms