RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 CCDC115Q96NT0 180 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 FOXN4Q96NZ1 517 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 ZNF385AQ96PM9 386 aaKnown RBP13.62□□□□□ -0.23
LINC01116-202ENST00000339037 SLC38A2Q96QD8 506 aa13.62□□□□□ -0.23
LINC01116-202ENST00000339037 VRK1Q99986 396 aaPredicted RBP13.62□□□□□ -0.23
LINC01116-202ENST00000339037 IGHV1-18A0A0C4DH31 117 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 LIPT2A6NK58 231 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 AQP7P3A6NL99 342 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 ZNF587BE7ETH6 402 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 SNNO75324 88 aaPredicted RBP13.61□□□□□ -0.23
LINC01116-202ENST00000339037 CRYAAP02489 173 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 CHRM4P08173 479 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 IL7RP16871 459 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 CXCR1P25024 350 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 EPHA3P29320 983 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 S100A3P33764 101 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 CDKN2CP42773 168 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 ANXA11P50995 505 aaKnown RBP13.61□□□□□ -0.23
LINC01116-202ENST00000339037 EPS8Q12929 822 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 OR7A5Q15622 319 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 OCLNQ16625 522 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 TBRG1Q3YBR2 411 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 IQCCQ4KMZ1 466 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 MRPL2Q5T653 305 aaKnown RBP13.61□□□□□ -0.23
LINC01116-202ENST00000339037 LRRC74BQ6ZQY2 392 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 CROCCP2Q86T23 111 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 TRIML2Q8N7C3 387 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 ZNF540Q8NDQ6 660 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 AURKBQ96GD4 344 aaPredicted RBP13.61□□□□□ -0.23
LINC01116-202ENST00000339037 BOD1Q96IK1 185 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 ALKBH3Q96Q83 286 aaPredicted RBP13.61□□□□□ -0.23
LINC01116-202ENST00000339037 KATNB1Q9BVA0 655 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 WDR55Q9H6Y2 383 aaPredicted RBP13.61□□□□□ -0.23
LINC01116-202ENST00000339037 MTHFD2LQ9H903 347 aaPredicted RBP13.61□□□□□ -0.23
LINC01116-202ENST00000339037 TMEM45AQ9NWC5 275 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 BTNL2Q9UIR0 455 aa13.61□□□□□ -0.23
LINC01116-202ENST00000339037 B9A039 149 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 PDE5AO76074 875 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 LGI1O95970 557 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 TGFAP01135 160 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 DBIP07108 87 aaKnown RBP13.6□□□□□ -0.23
LINC01116-202ENST00000339037 OR4A8P0C604 315 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 KITP10721 976 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 ZNF23P17027 643 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 RPS4Y1P22090 263 aaKnown RBP13.6□□□□□ -0.23
LINC01116-202ENST00000339037 UBE2NP61088 152 aaKnown RBP13.6□□□□□ -0.23
LINC01116-202ENST00000339037 TXNL4AP83876 142 aaKnown RBP13.6□□□□□ -0.23
LINC01116-202ENST00000339037 TMEM225Q6GV28 225 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 ZNF440Q8IYI8 595 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 OR1K1Q8NGR3 316 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 ITPKCQ96DU7 683 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 PANX1Q96RD7 426 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 BPESC1Q9GZL8 116 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 ADAM19Q9H013 955 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 PIF1Q9H611 641 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 ADPRHL2Q9NX46 363 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 GPR45Q9Y5Y3 372 aa13.6□□□□□ -0.23
LINC01116-202ENST00000339037 CCDC154A6NI56 674 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 OR6C65A6NJZ3 312 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 HDAC3O15379 428 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 GSNP06396 782 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 PGRP06401 933 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 NR2F1P10589 423 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 PAX7P23759 505 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 SELENOPP49908 381 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 SQLEQ14534 574 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 ADIPOQQ15848 244 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 GSTA3Q16772 222 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 VHLLQ6RSH7 139 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 PNPT1Q8TCS8 783 aaKnown RBP13.59□□□□□ -0.23
LINC01116-202ENST00000339037 ZNF317Q96PQ6 595 aaPredicted RBP13.59□□□□□ -0.23
LINC01116-202ENST00000339037 OR52E6Q96RD3 313 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 TAPBPLQ9BX59 468 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 MOV10Q9HCE1 1003 aaKnown RBP13.59□□□□□ -0.23
LINC01116-202ENST00000339037 THAP1Q9NVV9 213 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 RLIMQ9NVW2 624 aa13.59□□□□□ -0.23
LINC01116-202ENST00000339037 CDHR4A6H8M9 788 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 VAMP5O95183 116 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 CECR9P0C854 216 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 PPOXP50336 477 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 MAGOHP61326 146 aaKnown RBP13.58□□□□□ -0.24
LINC01116-202ENST00000339037 COPZ1P61923 177 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 NAAAQ02083 359 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 LGALS3BPQ08380 585 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 EFNB3Q15768 340 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 CR1LQ2VPA4 569 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 COX20Q5RI15 118 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 LIPNQ5VXI9 398 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 ANKRD16Q6P6B7 361 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 CREB3L2Q70SY1 520 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 MAVSQ7Z434 540 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 PEX5LQ8IYB4 626 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 CADM2Q8N3J6 435 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 BCL2L2Q92843 193 aaPredicted RBP13.58□□□□□ -0.24
LINC01116-202ENST00000339037 RAB1BQ9H0U4 201 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 PLK3Q9H4B4 646 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 ZFAND3Q9H8U3 227 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 SLC6A13Q9NSD5 602 aa13.58□□□□□ -0.24
LINC01116-202ENST00000339037 FBXO9Q9UK97 447 aaPredicted RBP13.58□□□□□ -0.24
LINC01116-202ENST00000339037 A0A096LPE4 126 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms