RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 NKAIN4Q8IVV8 208 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 RCBTB1Q8NDN9 531 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 SLC25A46Q96AG3 418 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 SORCS2Q96PQ0 1159 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 CDCA4Q9BXL8 241 aa12.75□□□□□ -0.37
RTN4-202ENST00000337526 TRABD2BA6NFA1 517 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 PIP5K1CO60331 668 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 GPX5O75715 221 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 CHRNB1P11230 501 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 GABRR1P24046 479 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 BCL6P41182 706 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 UNQ6126/PRO20091Q6UXV3 157 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 SMAP2Q8WU79 429 aaPredicted RBP12.74□□□□□ -0.37
RTN4-202ENST00000337526 RPS10P5Q9NQ39 176 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 MYH14Q7Z406 1995 aaKnown RBP12.74□□□□□ -0.37
RTN4-202ENST00000337526 TNFRSF10AO00220 468 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 BRINP1O60477 761 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 LGI1O95970 557 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 PIPP12273 146 aaPredicted RBP12.74□□□□□ -0.37
RTN4-202ENST00000337526 CLDN6P56747 220 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 TANGO2Q6ICL3 276 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 ZNF679Q8IYX0 411 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 LILRB2Q8N423 598 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 OR51Q1Q8NH59 317 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 SEC22AQ96IW7 307 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 HINT2Q9BX68 163 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 SEMA4GQ9NTN9 838 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 CORINQ9Y5Q5 1042 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 KNTC1P50748 2209 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 BLACEA4D250 179 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 LRIT2A6NDA9 550 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 ZNF254O75437 659 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 IGLV3-27P01718 113 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 CCR6P51684 374 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 YPEL5P62699 121 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 CLVS2Q5SYC1 327 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 ACSM5Q6NUN0 579 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 GDPD3Q7L5L3 318 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 OR13C9Q8NGT0 318 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 SENP5Q96HI0 755 aaPredicted RBP12.74□□□□□ -0.37
RTN4-202ENST00000337526 NELFAQ9H3P2 528 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 GALR3O60755 368 aaPredicted RBP12.74□□□□□ -0.37
RTN4-202ENST00000337526 ATP1B1P05026 303 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 CD14P08571 375 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 IGFBP1P08833 259 aaPredicted RBP12.74□□□□□ -0.37
RTN4-202ENST00000337526 ZDHHC11BP0C7U3 371 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 TSFMP43897 325 aaKnown RBP12.74□□□□□ -0.37
RTN4-202ENST00000337526 ZP2Q05996 745 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 METRNLQ641Q3 311 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 TMEM179BQ7Z7N9 219 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 SMIM3Q9BZL3 60 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 OR10A5Q9H207 317 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 OR10A2Q9H208 303 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 KLHL13Q9P2N7 655 aa12.74□□□□□ -0.37
RTN4-202ENST00000337526 K7ESM1 405 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 IGHG1P01857 330 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 EPHA2P29317 976 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 ETV5P41161 510 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 CX3CR1P49238 355 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 ETV1P50549 477 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 SEC61A1P61619 476 aaKnown RBP12.73□□□□□ -0.37
RTN4-202ENST00000337526 CYHR1Q6ZMK1 362 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 FAM160A2Q8N612 972 aaPredicted RBP12.73□□□□□ -0.37
RTN4-202ENST00000337526 ESX1Q8N693 406 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 PHYHIPQ92561 330 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 WBP2Q969T9 261 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 FYTTD1Q96QD9 318 aaKnown RBP12.73□□□□□ -0.37
RTN4-202ENST00000337526 HHIPQ96QV1 700 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 NUDT22Q9BRQ3 303 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 LRIT1Q9P2V4 623 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 MYO5AQ9Y4I1 1855 aaKnown RBP12.73□□□□□ -0.37
RTN4-202ENST00000337526 DDX60Q8IY21 1712 aaKnown RBP12.73□□□□□ -0.37
RTN4-202ENST00000337526 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 HTR2CP28335 458 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 UBE2NP61088 152 aaKnown RBP12.73□□□□□ -0.37
RTN4-202ENST00000337526 OR5T1Q8NG75 326 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 SLC41A2Q96JW4 573 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 HRH4Q9H3N8 390 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 ATP13A2Q9NQ11 1180 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 CUTCQ9NTM9 273 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 LRFN1Q9P244 771 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 B8ZZF3 427 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 BMP1P13497 986 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 PRKACAP17612 351 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 CD38P28907 300 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 TGFBR1P36897 503 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 TNFRSF4P43489 277 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 TNK1Q13470 666 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 TMEM31Q5JXX7 168 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 PAQR6Q6TCH4 344 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 TMEM64Q6YI46 380 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 CREB3L2Q70SY1 520 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 MRPL21Q7Z2W9 205 aaKnown RBP12.73□□□□□ -0.37
RTN4-202ENST00000337526 TECPR1Q7Z6L1 1165 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 TCTN2Q96GX1 697 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 TEAD3Q99594 435 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 HDAC8Q9BY41 377 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 GABARAPL3Q9BY60 117 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 ZDHHC5Q9C0B5 715 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 GABARAPL1Q9H0R8 117 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms