RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ZNF417Q8TAU3 575 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 RNF128Q8TEB7 428 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 ABHD3Q8WU67 409 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 LRTOMTQ8WZ04 291 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 STMN2Q93045 179 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZNF587Q96SQ5 575 aaPredicted RBP12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 RNF122Q9H9V4 155 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 CHST11Q9NPF2 352 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 KRCC1Q9NPI7 259 aaPredicted RBP12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 NANSQ9NR45 359 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 KLHL13Q9P2N7 655 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 SEC14L4Q9UDX3 406 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZNF229Q9UJW7 825 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 CLEC4AQ9UMR7 237 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 TMEM5Q9Y2B1 443 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 CORINQ9Y5Q5 1042 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 PHF3Q92576 2039 aaKnown RBP12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 HTR3EA5X5Y0 456 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 AQP7P3A6NL99 342 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 EFCAB9A8MZ26 197 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 H3BNX3 289 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR10H3O60404 316 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 RAMP1O60894 148 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 FZD7O75084 574 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 E2F6O75461 281 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 PLGP00747 810 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 HIST1H2ABP04908 130 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 MAKP20794 623 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 FASP25445 335 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 DNAJA1P31689 397 aaKnown RBP12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 CEACAM8P31997 349 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 GPR4P46093 362 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 IL1RL1Q01638 556 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 RASGEF1BQ0VAM2 473 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 PMS2P3Q13401 168 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 LAPTM4AQ15012 233 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 RNPS1Q15287 305 aaKnown RBP12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 ATP6AP1Q15904 470 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 MICAQ29983 383 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 RIPPLY2Q5TAB7 128 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 ABLIM2Q6H8Q1 611 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR2A2Q6IF42 318 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 H1FNTQ75WM6 255 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 HIST3H2AQ7L7L0 130 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 AMIGO2Q86SJ2 522 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 GCNT2Q8N0V5 402 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 SCAIQ8N9R8 606 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR5J2Q8NH18 312 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 RND1Q92730 232 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 HIST1H2ACQ93077 130 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 INTS12Q96CB8 462 aaKnown RBP12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 FAM46AQ96IP4 442 aaKnown RBP12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 S100A14Q9HCY8 104 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 MRPL39Q9NYK5 338 aaKnown RBP12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 SLC5A6Q9Y289 635 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 B3GALT5Q9Y2C3 310 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 POLEQ07864 2286 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 NBASA2RRP1 2371 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR6A2O95222 327 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 ASAH2BP0C7U1 165 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 TMIGD3P0DMS9 266 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 SAGP10523 405 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 IFNGR2P38484 337 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 OMPP47874 163 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 P2RY4P51582 365 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 GK3PQ14409 553 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 TMEM225Q6GV28 225 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 MTFR2Q6P444 385 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 TMPRSS11FQ6ZWK6 438 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZER1Q7Z7L7 766 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 TMEM179BQ7Z7N9 219 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 KDM8Q8N371 416 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 PIP4P2Q8N4L2 257 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 LINC00471Q8N535 108 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR9Q2Q8NGE9 314 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 LIPHQ8WWY8 451 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 CCDC120Q96HB5 630 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 PSD2Q9BQI7 771 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 BDH2Q9BUT1 245 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 NTN4Q9HB63 628 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 KLHL9Q9P2J3 617 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 RASD1Q9Y272 281 aa12.56□□□□□ -0.4
APOBEC3B-202ENST00000335760 A0A0G2JNJ9 132 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 HSPB2A8KAH6 182 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 MS4A18H0YCH9 400 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 PLPP3O14495 311 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 SIRPAP78324 504 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 ADORA2A-AS1P86434 159 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 FOXF2Q12947 444 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 PDK3Q15120 406 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 HSPB2Q16082 182 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 MS4A18Q3C1V0 323 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 HMBOX1Q6NT76 420 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 PGBD2Q6P3X8 592 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 NANOGNBQ7Z5D8 188 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 GPAT4Q86UL3 456 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 NAXEQ8NCW5 288 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 ADPRHL1Q8NDY3 354 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR10G2Q8NGC3 310 aa12.55□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR13C2Q8NGS9 318 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms