RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NSMAFQ92636 917 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 ZMYND19Q96E35 227 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-201ENST00000334136 OR1F2PQ96R84 312 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 SRA1Q9HD15 236 aaKnown RBP10.88□□□□□ -0.67
HDAC6-201ENST00000334136 GLTPQ9NZD2 209 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 ZFC3H1O60293 1989 aaKnown RBP10.88□□□□□ -0.67
HDAC6-201ENST00000334136 PCM1Q15154 2024 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 KIF26AQ9ULI4 1882 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-201ENST00000334136 UNC119BA6NIH7 251 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 SLC22A31A6NKX4 558 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 KRT33AO76009 404 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 CSTAP01040 98 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 SLC6A6P31641 620 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 RRADP55042 308 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 CDC20Q12834 499 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ISXQ2M1V0 245 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 PWWP2BQ6NUJ5 590 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 BTN2A1Q7KYR7 527 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 PRR22Q8IZ63 422 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 NLGN4YQ8NFZ3 816 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-201ENST00000334136 SENP5Q96HI0 755 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-201ENST00000334136 FER1L6-AS2Q96M78 137 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 SLC25A18Q9H1K4 315 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 GLIPR2Q9H4G4 154 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 PRDM7Q9NQW5 492 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 SIRT5Q9NXA8 310 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ASIC5Q9NY37 505 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 DOCK9Q9BZ29 2069 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 IGHV3-20A0A0C4DH32 117 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 HCRTR2O43614 444 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 PIP5K1CO60331 668 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 PRH1P02810 166 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 MAS1P04201 325 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 HTR1AP08908 422 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ARAFP10398 606 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 PEBP1P30086 187 aaKnown RBP10.87□□□□□ -0.67
HDAC6-201ENST00000334136 PSPHP78330 225 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 BTG2P78543 158 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 IFITM3Q01628 133 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 CRYZQ08257 329 aaKnown RBP10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ACSM3Q53FZ2 586 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ESCO2Q56NI9 601 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 LRIF1Q5T3J3 769 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 TM9SF4Q92544 642 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 AMDHD1Q96NU7 426 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF768Q9H5H4 540 aaKnown RBP10.87□□□□□ -0.67
HDAC6-201ENST00000334136 MED20Q9H944 212 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF639Q9UID6 485 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ZGLP1P0C6A0 271 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 LSSP48449 732 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 FAM199XQ6PEV8 388 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-201ENST00000334136 OR6N2Q8NGY6 317 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 OR5W2Q8NH69 310 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF705EA8MWA4 302 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-201ENST00000334136 FGF17O60258 216 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 RAD1O60671 282 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 P04436 131 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 SHC1P29353 583 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ELAVL1Q15717 326 aaKnown RBP10.87□□□□□ -0.67
HDAC6-201ENST00000334136 SLC22A10Q63ZE4 541 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ARSKQ6UWY0 536 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ATCAYQ86WG3 371 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 MMP21Q8N119 569 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 LNX2Q8N448 690 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 TAPBPLQ9BX59 468 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 ATP13A2Q9NQ11 1180 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 SERINC1Q9NRX5 453 aa10.87□□□□□ -0.67
HDAC6-201ENST00000334136 RABL2AQ9UBK7 228 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-201ENST00000334136 MEIS3P1A6NDR6 274 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 GKN3PP0CG01 181 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 MS4A15Q8N5U1 240 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 MED30Q96HR3 178 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 RXFP3Q9NSD7 469 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 NPAP1Q9NZP6 1156 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 COPZ2Q9P299 210 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 B3GALT1Q9Y5Z6 326 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 B4DXG7 233 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 PGAM2P15259 253 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 ENDOUP21128 410 aaKnown RBP10.86□□□□□ -0.67
HDAC6-201ENST00000334136 PSMB10P40306 273 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 GDI2P50395 445 aaKnown RBP10.86□□□□□ -0.67
HDAC6-201ENST00000334136 KCNJ10P78508 379 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 ARFRP1Q13795 201 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 LYPD4Q6UWN0 246 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 C3P1Q6ZMU1 363 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 PRSS41Q7RTY9 318 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 CREB3L4Q8TEY5 395 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 TSLPQ969D9 159 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 SLC41A3Q96GZ6 507 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 SLAMF7Q9NQ25 335 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 GSKIPQ9P0R6 139 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 RCE1Q9Y256 329 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 TMEM5Q9Y2B1 443 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 MRPS2Q9Y399 296 aaKnown RBP10.86□□□□□ -0.67
HDAC6-201ENST00000334136 A0A0G2JMP0 313 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 A0A1W2PQM1 296 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 OR2W5A6NFC9 320 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 M0R082 166 aa10.86□□□□□ -0.67
HDAC6-201ENST00000334136 ACP2P11117 423 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms