RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 LMX1BO60663 402 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 ZNF16P17020 682 aaPredicted RBP12.42□□□□□ -0.42
RPP40-201ENST00000319533 CDKN2CP42773 168 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 SLC1A3P43003 542 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 PRPS1P60891 318 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 C6orf10Q5SRN2 563 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 ZIC4Q8N9L1 334 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 OR9I1Q8NGQ6 314 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 TRNT1Q96Q11 434 aaKnown RBP12.42□□□□□ -0.42
RPP40-201ENST00000319533 EBF4Q9BQW3 602 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 SF3B5Q9BWJ5 86 aaKnown RBP12.42□□□□□ -0.42
RPP40-201ENST00000319533 ADAM19Q9H013 955 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 SHARPINQ9H0F6 387 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 SLC38A1Q9H2H9 487 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 OBP2BQ9NPH6 170 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 FGFR1OP2Q9NVK5 253 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 ZC3H12DA2A288 527 aaKnown RBP12.41□□□□□ -0.42
RPP40-201ENST00000319533 ATP6V1G2-DDX39BF2Z307 99 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 EDF1O60869 148 aaKnown RBP12.41□□□□□ -0.42
RPP40-201ENST00000319533 LY6HO94772 140 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 WNT11O96014 354 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 C1QCP02747 245 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 CCNA2P20248 432 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 RPS4Y1P22090 263 aaKnown RBP12.41□□□□□ -0.42
RPP40-201ENST00000319533 PAX7P23759 505 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 IGFBP5P24593 272 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 TACR3P29371 465 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 NR4A2P43354 598 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 MRPL19P49406 292 aaKnown RBP12.41□□□□□ -0.42
RPP40-201ENST00000319533 PDLIM4P50479 330 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 C9orf135Q5VTT2 229 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 LRRC74BQ6ZQY2 392 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 HMGN2P46Q86SG4 172 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 ARIH2OSQ8N7S6 290 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 POMGNT2Q8NAT1 580 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 PNPT1Q8TCS8 783 aaKnown RBP12.41□□□□□ -0.42
RPP40-201ENST00000319533 VPS33AQ96AX1 596 aa12.41□□□□□ -0.42
RPP40-201ENST00000319533 SLC35F4A4IF30 521 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 GMNCA6NCL1 334 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 LIPT2A6NK58 231 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 CHRM4P08173 479 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 VIMP08670 466 aaKnown RBP12.4□□□□□ -0.42
RPP40-201ENST00000319533 ZCCHC18P0CG32 403 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 NR2F1P10589 423 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 EPS8Q12929 822 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 GNA13Q14344 377 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 SYPL1Q16563 259 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 ANKFN1Q8N957 763 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 OR9K2Q8NGE7 335 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 MSI2Q96DH6 328 aaKnown RBP12.4□□□□□ -0.42
RPP40-201ENST00000319533 ZNF385AQ96PM9 386 aaKnown RBP12.4□□□□□ -0.42
RPP40-201ENST00000319533 SORCS2Q96PQ0 1159 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 SIKE1Q9BRV8 207 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 PRR14Q9BWN1 585 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 MTHFD2LQ9H903 347 aaPredicted RBP12.4□□□□□ -0.42
RPP40-201ENST00000319533 TPT1P8Q9HAU6 139 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 MYOZ1Q9NP98 299 aaPredicted RBP12.4□□□□□ -0.42
RPP40-201ENST00000319533 TMEM45AQ9NWC5 275 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 CRNNQ9UBG3 495 aaPredicted RBP12.4□□□□□ -0.42
RPP40-201ENST00000319533 P2RX2Q9UBL9 471 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 TRIM33Q9UPN9 1127 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 MOKQ9UQ07 419 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 FKBP7Q9Y680 259 aa12.4□□□□□ -0.42
RPP40-201ENST00000319533 IGHV1-18A0A0C4DH31 117 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 LOC390937A0A1W2PQ73 354 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 TMEM247A6NEH6 219 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 CFAP73A6NFT4 308 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 AQP7P3A6NL99 342 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 NR5A2O00482 541 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 PDE5AO76074 875 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 SRD5A1P18405 259 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 CRATP43155 626 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 ATP4BP51164 291 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 P2RY4P51582 365 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 SF3A3Q12874 501 aaKnown RBP eCLIP12.39□□□□□ -0.43
RPP40-201ENST00000319533 SQLEQ14534 574 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 C3orf36Q3SXR2 165 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 HIKESHIQ53FT3 197 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 COX20Q5RI15 118 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 FAM120AOSQ5T036 256 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 OTUD3Q5T2D3 398 aaPredicted RBP12.39□□□□□ -0.43
RPP40-201ENST00000319533 FAM166AQ6J272 317 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 KLHL24Q6TFL4 600 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 ABHD12BQ7Z5M8 362 aaPredicted RBP12.39□□□□□ -0.43
RPP40-201ENST00000319533 TMEM99Q8N816 258 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 STON2Q8WXE9 905 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 SPDL1Q96EA4 605 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 FBXO17Q96EF6 278 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 PIMREGQ9BSJ6 248 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 KATNB1Q9BVA0 655 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 C19orf24Q9BVV8 132 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 FAM107BQ9H098 131 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 RAD21L1Q9H4I0 556 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 CACYBPQ9HB71 228 aaKnown RBP12.39□□□□□ -0.43
RPP40-201ENST00000319533 NPHS2Q9NP85 383 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 THUMPD1Q9NXG2 353 aaKnown RBP12.39□□□□□ -0.43
RPP40-201ENST00000319533 CALML5Q9NZT1 146 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 CCDC167Q9P0B6 97 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 KCNS2Q9ULS6 477 aa12.39□□□□□ -0.43
RPP40-201ENST00000319533 ARPC4-TTLL3A0A0A6YYG9 625 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms