RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 SHISA5Q8N114 240 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ACTRT3Q9BYD9 372 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 TMPRSS13Q9BYE2 586 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 IL21RQ9HBE5 538 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 C2orf42Q9NWW7 574 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ZMAT5Q9UDW3 170 aaKnown RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF780BQ9Y6R6 833 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 A0A1W2PPV9 198 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 FBXO45P0C2W1 286 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 CD53P19397 219 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 PPP2CBP62714 309 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 SNRPNP63162 240 aaKnown RBP8.87□□□□□ -0.99
PTPRA-202ENST00000318266 PPP2CAP67775 309 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 GUCA2BQ16661 112 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 ZC3H14Q6PJT7 736 aaKnown RBP8.87□□□□□ -0.99
PTPRA-202ENST00000318266 TMEM64Q6YI46 380 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF546Q86UE3 836 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 NAXDQ8IW45 347 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 PTCHD1Q96NR3 888 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF471Q9BX82 626 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-202ENST00000318266 DPEP2Q9H4A9 486 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 EXO5Q9H790 373 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 MEPEQ9NQ76 525 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-202ENST00000318266 INPP5EQ9NRR6 644 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 V9GY05 133 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 A0A1B0GTH9 108 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 WASH3PC4AMC7 463 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 CCSO14618 274 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 GTF2F2P13984 249 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 HIST1H1CP16403 213 aaKnown RBP8.87□□□□□ -0.99
PTPRA-202ENST00000318266 NDUFS1P28331 727 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 UBE2IP63279 158 aaKnown RBP8.87□□□□□ -0.99
PTPRA-202ENST00000318266 OVCH1Q7RTY7 1134 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 SEC22AQ96IW7 307 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 LGR4Q9BXB1 951 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 PELI2Q9HAT8 420 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 CALML5Q9NZT1 146 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 PURGQ9UJV8 347 aaKnown RBP8.87□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF223Q9UK11 482 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-202ENST00000318266 MED31Q9Y3C7 131 aa8.87□□□□□ -0.99
PTPRA-202ENST00000318266 HMSDA8MTL9 139 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 SNRPGP15A8MWD9 76 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 ACOT7O00154 380 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 CCL16O15467 120 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 ZFPL1O95159 310 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 SOD2P04179 222 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 PCCBP05166 539 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 ATXN8OSP0DMR3 200 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 PVALBP20472 110 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-202ENST00000318266 AK4P27144 223 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-202ENST00000318266 CCR2P41597 374 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 NANOS3P60323 173 aaKnown RBP8.86□□□□□ -0.99
PTPRA-202ENST00000318266 BTN3A2P78410 334 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 PABPC1L2AQ5JQF8 200 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 SLC48A1Q6P1K1 146 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 SLC35F2Q8IXU6 374 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 PUSL1Q8N0Z8 303 aaKnown RBP8.86□□□□□ -0.99
PTPRA-202ENST00000318266 TEX19Q8NA77 164 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 OR5K2Q8NHB8 316 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 MS4A6EQ96DS6 147 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 TCEAL4Q96EI5 215 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 HSPA12BQ96MM6 686 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 CMSS1Q9BQ75 279 aaKnown RBP8.86□□□□□ -0.99
PTPRA-202ENST00000318266 DNTTIP1Q9H147 329 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 PLEKHA1Q9HB21 404 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 TCF7L1Q9HCS4 588 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 ASF1BQ9NVP2 202 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 MTCL1Q9Y4B5 1905 aaKnown RBP8.86□□□□□ -0.99
PTPRA-202ENST00000318266 LOC100509620A0A075B734 347 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 C4orf47A7E2U8 309 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 SPINT1O43278 529 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 RBBP9O75884 186 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 RASGRP1O95267 797 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 PAPLNO95428 1278 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 LRG1P02750 347 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 CSN2P05814 226 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 TYRP1P17643 537 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 SLC2A5P22732 501 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 MPGP29372 298 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 ACTC1P68032 377 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 ACTA1P68133 377 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 MESP2Q0VG99 397 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 KRT33BQ14525 404 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 RBMS2Q15434 407 aaKnown RBP8.86□□□□□ -0.99
PTPRA-202ENST00000318266 OTPQ5XKR4 325 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 MFSD12Q6NUT3 480 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 MCATQ8IVS2 390 aaKnown RBP8.86□□□□□ -0.99
PTPRA-202ENST00000318266 KCT2Q8NC54 265 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 SFXN5Q8TD22 340 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 NR4A3Q92570 626 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 IRF7Q92985 503 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 MRGPRX3Q96LB0 322 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 NMNAT3Q96T66 252 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 CNN2Q99439 309 aaKnown RBP8.86□□□□□ -0.99
PTPRA-202ENST00000318266 MTHFD2LQ9H903 347 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-202ENST00000318266 FBXO4Q9UKT5 387 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 PLEKHM1Q9Y4G2 1056 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 IER3IP1Q9Y5U9 82 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 HCFC2Q9Y5Z7 792 aa8.86□□□□□ -0.99
PTPRA-202ENST00000318266 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms