RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 RPS15P62841 145 aaKnown RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 PPP2CAP67775 309 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 TMEFF1Q8IYR6 380 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 OR52B4Q8NGK2 314 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 ZNF559Q9BR84 538 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 ZNF426Q9BUY5 554 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 ZNF416Q9BWM5 594 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 SAV1Q9H4B6 383 aaPredicted RBP12.34□□□□□ -0.43
SKA3-202ENST00000314759 MED9Q9NWA0 146 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
SKA3-202ENST00000314759 XIRP2A4UGR9 3374 aa12.33□□□□□ -0.43
SKA3-202ENST00000314759 ANKRD20A5PA0PJZ0 165 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 OR2M5A3KFT3 312 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 ANKRD61A6NGH8 418 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 LRRC72A6NJI9 287 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 IMPA2O14732 288 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 P2RX6O15547 441 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 CBX7O95931 251 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 DCTDP32321 178 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 RPS15AP62244 130 aaKnown RBP12.33□□□□□ -0.44
SKA3-202ENST00000314759 GGTLC2Q14390 218 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 EXOSC7Q15024 291 aaKnown RBP12.33□□□□□ -0.44
SKA3-202ENST00000314759 CLVS2Q5SYC1 327 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 MEIOBQ8N635 442 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 POMGNT2Q8NAT1 580 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 OR1S1Q8NH92 325 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 THEM6Q8WUY1 208 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 NPAS1Q99742 590 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 TAS2R5Q9NYW4 299 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 CPNE7Q9UBL6 633 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 FBXL3Q9UKT7 428 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 IER3IP1Q9Y5U9 82 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 A0A087WV48 116 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 ZNF860A6NHJ4 632 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 FAM74A7A6NL05 159 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 DNASE2O00115 360 aaPredicted RBP12.33□□□□□ -0.44
SKA3-202ENST00000314759 PSMD9O00233 223 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 BRINP1O60477 761 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 SELENOFO60613 162 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 KDM4BO94953 1096 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 OR2A4O95047 310 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 C4BPBP20851 252 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 TLX1P31314 330 aaPredicted RBP12.33□□□□□ -0.44
SKA3-202ENST00000314759 GABRA3P34903 492 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 WASP42768 502 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 TCEA2Q15560 299 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 C2orf68Q2NKX9 166 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 FAM74A3Q4VXF1 159 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 ZNF614Q8N883 585 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 CDRT4Q8N9R6 151 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 OR14A16Q8NHC5 309 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 NT5CQ8TCD5 201 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 OR2A7Q96R45 310 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 SERINC2Q96SA4 455 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 PCDHB16Q9NRJ7 776 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 CXXC1Q9P0U4 656 aaPredicted RBP12.33□□□□□ -0.44
SKA3-202ENST00000314759 FOXJ3Q9UPW0 622 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 ADAM18Q9Y3Q7 739 aa12.33□□□□□ -0.44
SKA3-202ENST00000314759 OR6C65A6NJZ3 312 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 MCIDASD6RGH6 385 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 B3GALNT1O75752 331 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 SLC35G6P0C7Q6 338 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 SMIM10L1P0DMW3 83 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 P2RX1P51575 399 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 RIPPLY1Q0D2K3 151 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 GAS6Q14393 721 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 OLFML2AQ68BL7 652 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 ZNF626Q68DY1 528 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 PWWP2BQ6NUJ5 590 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 TMUB2Q71RG4 321 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 SYNPRQ8TBG9 265 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 SCARB1Q8WTV0 552 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 LCN9Q8WX39 176 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 SMIM10Q96HG1 83 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 EXOSC3Q9NQT5 275 aaKnown RBP12.32□□□□□ -0.44
SKA3-202ENST00000314759 C14orf105Q9NVL8 296 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 OR5V1Q9UGF6 321 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 GLS2Q9UI32 602 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 SLC17A4Q9Y2C5 497 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 SLC22A7Q9Y694 548 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 CREBL2O60519 120 aaPredicted RBP12.32□□□□□ -0.44
SKA3-202ENST00000314759 EML2O95834 649 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 S100A11P31949 105 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 DIO1P49895 249 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 MNX1P50219 401 aaPredicted RBP12.32□□□□□ -0.44
SKA3-202ENST00000314759 NANOS3P60323 173 aaKnown RBP12.32□□□□□ -0.44
SKA3-202ENST00000314759 RAP2BP61225 183 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 ZNF169Q14929 603 aaPredicted RBP12.32□□□□□ -0.44
SKA3-202ENST00000314759 PON3Q15166 354 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 TMEM69Q5SWH9 247 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 EID2Q8N6I1 236 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 C1orf216Q8TAB5 229 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 RGP1Q92546 391 aaPredicted RBP12.32□□□□□ -0.44
SKA3-202ENST00000314759 PHYHIPQ92561 330 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 SMARCD2Q92925 531 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 ZNF707Q96C28 371 aaPredicted RBP12.32□□□□□ -0.44
SKA3-202ENST00000314759 MRPS24Q96EL2 167 aaKnown RBP12.32□□□□□ -0.44
SKA3-202ENST00000314759 S100A16Q96FQ6 103 aaKnown RBP12.32□□□□□ -0.44
SKA3-202ENST00000314759 STACQ99469 402 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms