RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ADH6P28332 368 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 GPR85P60893 370 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 IL10RAQ13651 578 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 CNIH2Q6PI25 160 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 ZNF695Q8IW36 515 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 SPARTQ8N0X7 666 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 FRMD1Q8N878 549 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 GLYATL2Q8WU03 294 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 YBX2Q9Y2T7 364 aaKnown RBP17.13■□□□□ 0.33
PCDH1-201ENST00000287008 TTC3P53804 2025 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 RP1P56715 2156 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 SLC6A12P48065 614 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 RGS19P49795 217 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 CRMP1Q14194 572 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 ZNF684Q5T5D7 378 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 C1orf140Q5VVS0 124 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 SNAPC3Q92966 411 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 RSPRY1Q96DX4 576 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 RANBP3Q9H6Z4 567 aaPredicted RBP17.13■□□□□ 0.33
PCDH1-201ENST00000287008 BCAS1O75363 584 aaPredicted RBP17.12■□□□□ 0.33
PCDH1-201ENST00000287008 CTSLP07711 333 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 OR2T7P0C7T2 308 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 SERPINA2P20848 420 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 PRKACBP22694 351 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 GFERP55789 205 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 MPEG1Q2M385 716 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 SPRED3Q2MJR0 410 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 SERPINA12Q8IW75 414 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 OR2T27Q8NH04 317 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 NMNAT3Q96T66 252 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 SGPP1Q9BX95 441 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 MAN2C1Q9NTJ4 1040 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 ZNF281Q9Y2X9 895 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 NRG2O14511 850 aaPredicted RBP17.12■□□□□ 0.33
PCDH1-201ENST00000287008 FZD6O60353 706 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 GPR176Q14439 515 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 TBCEQ15813 527 aaPredicted RBP17.12■□□□□ 0.33
PCDH1-201ENST00000287008 ZNF585AQ6P3V2 769 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 TMEM71Q6P5X7 295 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 BORAQ6PGQ7 559 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 TBPL2Q6SJ96 375 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 CAMKMTQ7Z624 323 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 CCDC86Q9H6F5 360 aaKnown RBP17.12■□□□□ 0.33
PCDH1-201ENST00000287008 ASB4Q9Y574 426 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 B4GAT1O43505 415 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 TP53P04637 393 aaPredicted RBP17.12■□□□□ 0.33
PCDH1-201ENST00000287008 MSL3P1P0C860 447 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 OR13C9Q8NGT0 318 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 SLC7A13Q8TCU3 470 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 APH1AQ96BI3 265 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 C19orf43Q9BQ61 176 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 ANKRD19PQ9H560 264 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 A0A0A6YYH2 397 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 A6NJ64 397 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 I3L521 148 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 MAKP20794 623 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 CA5AP35218 305 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 CYCSP99999 105 aaKnown RBP17.12■□□□□ 0.33
PCDH1-201ENST00000287008 HLA-BQ31612 363 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 RTL6Q6ICC9 239 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 TUBB1Q9H4B7 451 aa17.12■□□□□ 0.33
PCDH1-201ENST00000287008 HMX3A6NHT5 357 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 FGF17O60258 216 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 SLC34A2O95436 690 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 MT-ATP6P00846 226 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 MTCP1P56278 107 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 MLLT11Q13015 90 aaPredicted RBP17.11■□□□□ 0.33
PCDH1-201ENST00000287008 TEX101Q9BY14 249 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 TJP1Q07157 1748 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 DSCR3O14972 297 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 ILKQ13418 452 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 RAB31Q13636 194 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 ZNF691Q5VV52 312 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 DPY19L2P2Q6ZN68 376 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 GDF7Q7Z4P5 450 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 ABHD11Q8NFV4 315 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 C8orf44Q96CB5 159 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 PHB2Q99623 299 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 CSF1P09603 554 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 NID1P14543 1247 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 H1FNTQ75WM6 255 aaPredicted RBP17.11■□□□□ 0.33
PCDH1-201ENST00000287008 NDUFAF7Q7L592 441 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 CXorf51AA0A1B0GTR3 108 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 ALPLP05186 524 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 P2RX1P51575 399 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 FAM53BQ14153 422 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 Q6ZPB1 254 aaPredicted RBP17.11■□□□□ 0.33
PCDH1-201ENST00000287008 CPEB2Q7Z5Q1 589 aaKnown RBP17.11■□□□□ 0.33
PCDH1-201ENST00000287008 FUNDC1Q8IVP5 155 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 SIMC1Q8NDZ2 872 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 SYNPRQ8TBG9 265 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 METTL9Q9H1A3 318 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 MED20Q9H944 212 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 LRFN1Q9P244 771 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 RASD1Q9Y272 281 aa17.11■□□□□ 0.33
PCDH1-201ENST00000287008 TRBV5-4A0A0C4DH59 114 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 NAP1L6A6NFF2 107 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 TMPRSS11DO60235 418 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 VAMP5O95183 116 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 FCGR2AP12318 317 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms