RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 TMEFF2Q9UIK5 374 aaPredicted RBP21.81■■□□□ 1.08
SCN1B-201ENST00000262631 MITFO75030 526 aaPredicted RBP21.8■■□□□ 1.08
SCN1B-201ENST00000262631 ABOP16442 354 aa21.8■■□□□ 1.08
SCN1B-201ENST00000262631 ZNF26P17031 533 aaPredicted RBP21.8■■□□□ 1.08
SCN1B-201ENST00000262631 P2RY4P51582 365 aa21.8■■□□□ 1.08
SCN1B-201ENST00000262631 RPS3AP61247 264 aaKnown RBP21.8■■□□□ 1.08
SCN1B-201ENST00000262631 ZNF239Q16600 458 aaKnown RBP21.8■■□□□ 1.08
SCN1B-201ENST00000262631 PDSS1Q5T2R2 415 aa21.8■■□□□ 1.08
SCN1B-201ENST00000262631 OGFRL1Q5TC84 451 aaPredicted RBP21.8■■□□□ 1.08
SCN1B-201ENST00000262631 KDM4DQ6B0I6 523 aa21.8■■□□□ 1.08
SCN1B-201ENST00000262631 KLHL17Q6TDP4 642 aa21.8■■□□□ 1.08
SCN1B-201ENST00000262631 CD163Q86VB7 1156 aa21.8■■□□□ 1.08
SCN1B-201ENST00000262631 FAM57AQ8TBR7 257 aa21.8■■□□□ 1.08
SCN1B-201ENST00000262631 ROBO4Q8WZ75 1007 aa21.8■■□□□ 1.08
SCN1B-201ENST00000262631 TNFRSF13CQ96RJ3 184 aa21.8■■□□□ 1.08
SCN1B-201ENST00000262631 SHANK1Q9Y566 2161 aa21.8■■□□□ 1.08
SCN1B-201ENST00000262631 UNC119BA6NIH7 251 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 CLCA1A8K7I4 914 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 SMAD9O15198 467 aaKnown RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 ALPLP05186 524 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 FXYD6P3P58550 94 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 PON3Q15166 354 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 PPP4R4Q6NUP7 873 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 ZNF585AQ6P3V2 769 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 PAQR6Q6TCH4 344 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 FNDC9Q8TBE3 224 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 CPNE4Q96A23 557 aaPredicted RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 TIGARQ9NQ88 270 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 MRPL39Q9NYK5 338 aaKnown RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 RALYQ9UKM9 306 aaKnown RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 SIGLEC7Q9Y286 467 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 ZNF835Q9Y2P0 537 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 CORINQ9Y5Q5 1042 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 COL6A6A6NMZ7 2263 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 BLOC1S5-TXNDC5H3BN57 136 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 SLC19A2O60779 497 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 C1QL1O75973 258 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 IGFBP1P08833 259 aaPredicted RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 GTF2E2P29084 291 aaKnown RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 AGFG1P52594 562 aaKnown RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 NUP107P57740 925 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 RPS4XP62701 263 aaKnown RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 DAG1Q14118 895 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 MFSD13AQ14CX5 517 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 SOWAHCQ53LP3 525 aaPredicted RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 GALNT5Q7Z7M9 940 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 ADGRE4PQ86SQ3 457 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 KIF18BQ86Y91 864 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 KDM8Q8N371 416 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 ST6GALNAC3Q8NDV1 305 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 OR5J2Q8NH18 312 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 MOSPD2Q8NHP6 518 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 ZPLD1Q8TCW7 415 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 MAGEE2Q8TD90 523 aaPredicted RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 RBM4BQ9BQ04 359 aaKnown RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 RBM4Q9BWF3 364 aaKnown RBP21.79■■□□□ 1.08
SCN1B-201ENST00000262631 ASPNQ9BXN1 380 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 ENKD1Q9H0I2 346 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 ZNF556Q9HAH1 456 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 MCCC2Q9HCC0 563 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 CHST11Q9NPF2 352 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 REV1Q9UBZ9 1251 aa21.79■■□□□ 1.08
SCN1B-201ENST00000262631 RELNP78509 3460 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 PLPP3O14495 311 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 DNPH1O43598 174 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 PTP4A3O75365 173 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 AQP8O94778 261 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 SOX14O95416 240 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 TP53P04637 393 aaPredicted RBP21.78■■□□□ 1.08
SCN1B-201ENST00000262631 TSPAN19P0C672 248 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 SLC9A3P48764 834 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 PMS2P3Q13401 168 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 CD300LDQ6UXZ3 194 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 C3P1Q6ZMU1 363 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 H1FNTQ75WM6 255 aaPredicted RBP21.78■■□□□ 1.08
SCN1B-201ENST00000262631 CHMP1BQ7LBR1 199 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 NANOGNBQ7Z5D8 188 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 SCAIQ8N9R8 606 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 UCK2Q9BZX2 261 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 PAQR5Q9NXK6 330 aaPredicted RBP21.78■■□□□ 1.08
SCN1B-201ENST00000262631 TAS2R5Q9NYW4 299 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 IL20RAQ9UHF4 553 aa21.78■■□□□ 1.08
SCN1B-201ENST00000262631 AQP7P3A6NL99 342 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 EIF1BO60739 113 aaKnown RBP21.77■■□□□ 1.08
SCN1B-201ENST00000262631 TGM6O95932 706 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 HPRP00739 348 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 HIST1H2ABP04908 130 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 UQCRC1P31930 480 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 AQP2P41181 271 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 ALDH3A2P51648 485 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 IL1RL1Q01638 556 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 ZBED5Q49AG3 693 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 ACSF3Q4G176 576 aaPredicted RBP21.77■■□□□ 1.08
SCN1B-201ENST00000262631 ZNF620Q6ZNG0 422 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 HIST3H2AQ7L7L0 130 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 ZNF843Q8N446 348 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 GALNT4Q8N4A0 578 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 HIST1H2ACQ93077 130 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 EGLN3Q9H6Z9 239 aa21.77■■□□□ 1.08
SCN1B-201ENST00000262631 PAPOLBQ9NRJ5 636 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms