RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 WDR31Q8NA23 367 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 TMEM19Q96HH6 336 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 ZNF385AQ96PM9 386 aaKnown RBP10.72□□□□□ -0.69
TRAF4-202ENST00000262396 ALKBH3Q96Q83 286 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-202ENST00000262396 SLC38A2Q96QD8 506 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 SPATA9Q9BWV2 254 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 ADAM19Q9H013 955 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 PIF1Q9H611 641 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 TPT1P8Q9HAU6 139 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 MOV10Q9HCE1 1003 aaKnown RBP10.72□□□□□ -0.69
TRAF4-202ENST00000262396 LPAR3Q9UBY5 353 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 KCNS2Q9ULS6 477 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 A0A096LPE4 126 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 A0A1W2PPZ6 126 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 SLC43A1O75387 559 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 F12P00748 615 aaPredicted RBP10.71□□□□□ -0.69
TRAF4-202ENST00000262396 C1QCP02747 245 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 THBS1P07996 1170 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 TFPTP0C1Z6 253 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 RPS4Y1P22090 263 aaKnown RBP10.71□□□□□ -0.69
TRAF4-202ENST00000262396 NTF4P34130 210 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 SERPINF1P36955 418 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 GZMKP49863 264 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 SELENOPP49908 381 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 CLDN17P56750 224 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 LSM11P83369 360 aaKnown RBP eCLIP10.71□□□□□ -0.691e-7■■■□□ 18.3
TRAF4-202ENST00000262396 LOXL1Q08397 574 aaPredicted RBP10.71□□□□□ -0.69
TRAF4-202ENST00000262396 TBRG1Q3YBR2 411 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 KRT73Q86Y46 540 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 GPR137CQ8N3F9 429 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 OR10H5Q8NGA6 315 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 SLC38A5Q8WUX1 472 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 PROX1Q92786 737 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 CHODLQ9H9P2 273 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 ZIM2Q9NZV7 527 aa10.71□□□□□ -0.69
TRAF4-202ENST00000262396 FRS3O43559 492 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 ERLIN1O75477 346 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 FAM157CP0CG43 387 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 APEHP13798 732 aaKnown RBP10.7□□□□□ -0.7
TRAF4-202ENST00000262396 NQO1P15559 274 aaKnown RBP10.7□□□□□ -0.7
TRAF4-202ENST00000262396 ZNF16P17020 682 aaPredicted RBP10.7□□□□□ -0.7
TRAF4-202ENST00000262396 RPS5P46782 204 aaKnown RBP10.7□□□□□ -0.7
TRAF4-202ENST00000262396 SH3BGRP55822 239 aaPredicted RBP10.7□□□□□ -0.7
TRAF4-202ENST00000262396 TUBA1BP68363 451 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 TUBA4AP68366 448 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 VLDLRP98155 873 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 ROR2Q01974 943 aaKnown RBP10.7□□□□□ -0.7
TRAF4-202ENST00000262396 NPRL3Q12980 569 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 MPP2Q14168 576 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 RNF220Q5VTB9 566 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 AP1ARQ63HQ0 302 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 MSANTD1Q6ZTZ1 278 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 CREB3L2Q70SY1 520 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 TUBA1AQ71U36 451 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 SERPINA11Q86U17 422 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 CLIP4Q8N3C7 705 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 C10orf53Q8N6V4 93 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 GOLGA6L1Q8N7Z2 621 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 ZNF540Q8NDQ6 660 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 OR1K1Q8NGR3 316 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 BBS10Q8TAM1 723 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 STK35Q8TDR2 534 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 C10orf105Q8TEF2 133 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 KATNB1Q9BVA0 655 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 SPATA5L1Q9BVQ7 753 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 RAB1BQ9H0U4 201 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 DYNLRB1Q9NP97 96 aa10.7□□□□□ -0.7
TRAF4-202ENST00000262396 FBXO9Q9UK97 447 aaPredicted RBP10.7□□□□□ -0.7
TRAF4-202ENST00000262396 CADP27708 2225 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 CHD3Q12873 2000 aaKnown RBP10.69□□□□□ -0.7
TRAF4-202ENST00000262396 IGHV1-18A0A0C4DH31 117 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 LOC100289279A0A1B0GTE1 492 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 B9A039 149 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 PDLIM1O00151 329 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 NDUFS8O00217 210 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 CLIC1O00299 241 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 AIM2O14862 343 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 POLR3GO15318 223 aaPredicted RBP10.69□□□□□ -0.7
TRAF4-202ENST00000262396 OR2T1O43869 369 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 LMX1BO60663 402 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 LY6HO94772 140 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 OR4A8P0C604 315 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 ZCCHC18P0CG32 403 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 CBLP22681 906 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 ACAA2P42765 397 aaKnown RBP10.69□□□□□ -0.7
TRAF4-202ENST00000262396 MAGOHP61326 146 aaKnown RBP10.69□□□□□ -0.7
TRAF4-202ENST00000262396 SLC25A3Q00325 362 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 PLAURQ03405 335 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 GTDC1Q4AE62 458 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 SLC9B1Q4ZJI4 515 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 FAM166AQ6J272 317 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 ANKRD16Q6P6B7 361 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 DNM1P46Q6ZS02 220 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 KDM8Q8N371 416 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 OR4F15Q8NGB8 312 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 MFSD8Q8NHS3 518 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 SLC38A4Q969I6 547 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 VPS33AQ96AX1 596 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 MYOZ1Q9NP98 299 aaPredicted RBP10.69□□□□□ -0.7
TRAF4-202ENST00000262396 B3GAT2Q9NPZ5 323 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms