RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZNF20P17024 532 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 TAS2R20P59543 309 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 DOC2AQ14183 400 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 ADGRF1Q5T601 910 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 ATPAF1Q5TC12 328 aaPredicted RBP11.97□□□□□ -0.49
VAMP4-201ENST00000236192 RNLSQ5VYX0 342 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 ATRAIDQ6UW56 229 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 CD300LGQ6UXG3 332 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 MEX3DQ86XN8 651 aaKnown RBP11.97□□□□□ -0.49
VAMP4-201ENST00000236192 OR5H2Q8NGV7 314 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 NUDCD2Q8WVJ2 157 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 KATNBL1Q9H079 304 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 PDLIM7Q9NR12 457 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 KCMF1Q9P0J7 381 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 GJD2Q9UKL4 321 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 FBXO7Q9Y3I1 522 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
VAMP4-201ENST00000236192 TBL1XO60907 577 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 HBE1P02100 147 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 TMEM115Q12893 351 aaPredicted RBP11.97□□□□□ -0.49
VAMP4-201ENST00000236192 TMEM201Q5SNT2 666 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 GPR157Q5UAW9 335 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 AFMIDQ63HM1 303 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 ZNF248Q8NDW4 579 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 DVL3Q92997 716 aaPredicted RBP11.97□□□□□ -0.49
VAMP4-201ENST00000236192 STRAPQ9Y3F4 350 aaKnown RBP11.97□□□□□ -0.49
VAMP4-201ENST00000236192 NME2P1O60361 137 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 SLC25A12O75746 678 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 DRD2P14416 443 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 SRMP19623 302 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 SERPINA2P20848 420 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 CSNK1EP49674 416 aaKnown RBP11.97□□□□□ -0.49
VAMP4-201ENST00000236192 TIGD5Q53EQ6 642 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 ESPNLQ6ZVH7 1005 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 OR51A7Q8NH64 312 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 UCK1Q9HA47 277 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 OPN4Q9UHM6 478 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 OR5H15A6NDH6 313 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 OR5H1A6NKK0 313 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 NUDT14O95848 222 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 PLGP00747 810 aaPredicted RBP11.97□□□□□ -0.49
VAMP4-201ENST00000236192 KLK3P07288 261 aaPredicted RBP11.97□□□□□ -0.49
VAMP4-201ENST00000236192 NPBWR1P48145 328 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 CBFBQ13951 182 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 ZNF385CQ66K41 422 aaPredicted RBP11.97□□□□□ -0.49
VAMP4-201ENST00000236192 LAIR2Q6ISS4 152 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 FBXL22Q6P050 247 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 SEZ6L2Q6UXD5 910 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 ISOC2Q96AB3 205 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 PARD6AQ9NPB6 346 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 FTSJ1Q9UET6 329 aa11.97□□□□□ -0.49
VAMP4-201ENST00000236192 PPP5D1E7EU14 171 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 CCL23P55773 120 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 ERV3-1Q14264 604 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 UPP1Q16831 310 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 AMIGO3Q86WK7 504 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 PTOV1Q86YD1 416 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 COX18Q8N8Q8 333 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 OR52E2Q8NGJ4 325 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 KCNK12Q9HB15 430 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 DCTDP32321 178 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 CASRP41180 1078 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 ZNF140P52738 457 aaPredicted RBP11.96□□□□□ -0.49
VAMP4-201ENST00000236192 SIRPAP78324 504 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 ZNF660Q6AZW8 331 aaPredicted RBP11.96□□□□□ -0.49
VAMP4-201ENST00000236192 P4HA3Q7Z4N8 544 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 CCDC54Q8NEL0 328 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 PDE7BQ9NP56 450 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 AUP1Q9Y679 476 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 A0A0B4J293 547 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 PSMB10P40306 273 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 ACY1Q03154 408 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 SLC10A1Q14973 349 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 PLEKHS1Q5SXH7 462 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 SDHAF4Q5VUM1 108 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 HMGN2P46Q86SG4 172 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 GPR148Q8TDV2 347 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 SAT2Q96F10 170 aaPredicted RBP11.96□□□□□ -0.49
VAMP4-201ENST00000236192 PLEKHA1Q9HB21 404 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 C2orf42Q9NWW7 574 aa11.96□□□□□ -0.49
VAMP4-201ENST00000236192 ACOD1A6NK06 481 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 GSTZ1O43708 216 aaPredicted RBP11.96□□□□□ -0.5
VAMP4-201ENST00000236192 KDELR3O43731 214 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 OR1F1O43749 312 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 RECKO95980 971 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 IGFBP1P08833 259 aaPredicted RBP11.96□□□□□ -0.5
VAMP4-201ENST00000236192 SUOXP51687 545 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 TAF9Q16594 264 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 GGTA1PQ4G0N0 100 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 PIP5KL1Q5T9C9 394 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 TMEM130Q8N3G9 435 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 TRAM1L1Q8N609 369 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 ZNF75AQ96N20 296 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 ABHD1Q96SE0 405 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 PATZ1Q9HBE1 687 aaKnown RBP11.96□□□□□ -0.5
VAMP4-201ENST00000236192 LYRM2Q9NU23 88 aaPredicted RBP11.96□□□□□ -0.5
VAMP4-201ENST00000236192 TMEM14AQ9Y6G1 99 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 ANKRD36CQ5JPF3 1778 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 PLCH1Q4KWH8 1693 aa11.96□□□□□ -0.5
VAMP4-201ENST00000236192 TJP1Q07157 1748 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms