RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 TMEM53Q6P2H8 277 aa16.52■□□□□ 0.23
USP18-201ENST00000215794 FAM131AQ6UXB0 335 aa16.52■□□□□ 0.23
USP18-201ENST00000215794 C17orf47Q8NEP4 570 aa16.52■□□□□ 0.23
USP18-201ENST00000215794 OR5J2Q8NH18 312 aa16.52■□□□□ 0.23
USP18-201ENST00000215794 PPIL3Q9H2H8 161 aaKnown RBP16.52■□□□□ 0.23
USP18-201ENST00000215794 CCDC86Q9H6F5 360 aaKnown RBP16.52■□□□□ 0.23
USP18-201ENST00000215794 CPNE5Q9HCH3 593 aa16.52■□□□□ 0.23
USP18-201ENST00000215794 INPP5EQ9NRR6 644 aa16.52■□□□□ 0.23
USP18-201ENST00000215794 OCIAD1Q9NX40 245 aa16.52■□□□□ 0.23
USP18-201ENST00000215794 HAO2Q9NYQ3 351 aa16.52■□□□□ 0.23
USP18-201ENST00000215794 COMMD3Q9UBI1 195 aa16.52■□□□□ 0.23
USP18-201ENST00000215794 SPAARA0A1B0GVQ0 90 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 RGS9O75916 674 aaPredicted RBP16.51■□□□□ 0.23
USP18-201ENST00000215794 MT-ND5P03915 603 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 S100A1P23297 94 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 ZNF117Q03924 483 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 EGR4Q05215 589 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 GLYR1Q49A26 553 aaPredicted RBP16.51■□□□□ 0.23
USP18-201ENST00000215794 DHRS13Q6UX07 377 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 SLC43A2Q8N370 569 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 C10orf53Q8N6V4 93 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 DNAJA3Q96EY1 480 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 DIRAS2Q96HU8 199 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 RNF32Q9H0A6 362 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 APMAPQ9HDC9 416 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 SLC22A11Q9NSA0 550 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 CNOT1A5YKK6 2376 aaKnown RBP16.51■□□□□ 0.23
USP18-201ENST00000215794 IGHV3-20A0A0C4DH32 117 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 PMS2P1A4D2B8 440 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 BLOC1S5-TXNDC5H3BN57 136 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 WISP1O95388 367 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 AQP2P41181 271 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 SLC3A1Q07837 685 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 SQSTM1Q13501 440 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 CARTPTQ16568 116 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 FAM27D1Q5T7N8 215 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 DDI2Q5TDH0 399 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 LYPD4Q6UWN0 246 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 DPY19L2P2Q6ZN68 376 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 SPATC1Q76KD6 591 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 COX15Q7KZN9 410 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 MARCH3Q86UD3 253 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 NR2C2APQ86WQ0 139 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 NPEPL1Q8NDH3 523 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 COQ7Q99807 217 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 CTRCQ99895 268 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 ATF6BQ99941 703 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 WWTR1Q9GZV5 400 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 NRIP3Q9NQ35 241 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 EXOSC3Q9NQT5 275 aaKnown RBP16.51■□□□□ 0.23
USP18-201ENST00000215794 POLHQ9Y253 713 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 CEP250Q9BV73 2442 aa16.51■□□□□ 0.23
USP18-201ENST00000215794 OR6C68A6NDL8 312 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 TPD52L2O43399 206 aaKnown RBP16.5■□□□□ 0.23
USP18-201ENST00000215794 GP1BAP07359 652 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 IL12BP29460 328 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 LTBQ06643 244 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 TRIP6Q15654 476 aaKnown RBP16.5■□□□□ 0.23
USP18-201ENST00000215794 TOMM34Q15785 309 aaPredicted RBP16.5■□□□□ 0.23
USP18-201ENST00000215794 ZNF74Q16587 644 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 TP53I3Q53FA7 332 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 VASH1Q7L8A9 365 aaPredicted RBP16.5■□□□□ 0.23
USP18-201ENST00000215794 PIP4P1Q86T03 277 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 ZNF563Q8TA94 476 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 OR6C1Q96RD1 312 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 SLC19A3Q9BZV2 496 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 KLHL21Q9UJP4 597 aa16.5■□□□□ 0.23
USP18-201ENST00000215794 PROB1E7EW31 1015 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 TIAF1O95411 115 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 PNMTP11086 282 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 TACR3P29371 465 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 ACVR1BP36896 505 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 INSM1Q01101 510 aaPredicted RBP16.49■□□□□ 0.23
USP18-201ENST00000215794 HLA-DQA1Q5Y7H0 255 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 POMZP3Q6PJE2 187 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 CCBE1Q6UXH8 406 aaPredicted RBP16.49■□□□□ 0.23
USP18-201ENST00000215794 SLC38A9Q8NBW4 561 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 OR14A16Q8NHC5 309 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 AP3S1Q92572 193 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 DAZLQ92904 295 aaKnown RBP16.49■□□□□ 0.23
USP18-201ENST00000215794 PMEPA1Q969W9 287 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 TP53INP1Q96A56 240 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 KTI12Q96EK9 354 aaPredicted RBP16.49■□□□□ 0.23
USP18-201ENST00000215794 DDOQ99489 341 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 SACM1LQ9NTJ5 587 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 TEX13CA0A0J9YWL9 993 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 LINC00854A0A1B0GVQ3 168 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 FABP12A6NFH5 140 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 FAM171A2A8MVW0 826 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 HCRTR2O43614 444 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 TSPAN2O60636 221 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 HPGDSO60760 199 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 IL7P13232 177 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 CCL4P13236 92 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 PYCR1P32322 319 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 DEFA1P59665 94 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 DEFA3P59666 94 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 PLCXD2Q0VAA5 305 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 GPR50Q13585 617 aa16.49■□□□□ 0.23
USP18-201ENST00000215794 NDUFA5Q16718 116 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms