RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Q9CWU4 180 aaKnown RBP8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Dcun1d5Q9CXV9 237 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rpl15Q9CZM2 204 aaKnown RBP8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn1r50Q9EP51 310 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 GlmpQ9JHJ3 404 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cts8Q9JI81 333 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 TfecQ9WTW4 317 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fbln5Q9WVH9 448 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1369-ps1A0A140T8K7 317 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm36210A0A1B0GS00 229 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Dgat2l6A2ADU8 337 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ankrd16A2AS55 361 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Xlr5aA2BI45 236 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tmem229aB9EJI9 371 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm4177D3YTX5 305 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn2r98E9PZ56 857 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Zfp867E9Q2M4 473 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cdh18E9Q9Q6 790 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ccdc7bE9Q9Y3 381 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm8909G3UXE9 396 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn1r127K7N6J5 305 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn2r46L7N282 809 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ech1O35459 327 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Serpini1O35684 410 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Timp1P12032 205 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Defa-rs1P17533 116 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Krt19P19001 403 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 ThP24529 498 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Hmx2P43687 273 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Kcnj9P48543 393 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Hsd17b3P70385 305 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mmp11Q02853 492 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Smpd1Q04519 627 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Spata46Q4FZF2 204 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Xlr3cQ61806 226 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tatdn1Q6P8M1 295 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr744Q7TRM0 323 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tox4Q8BU11 619 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Synpo2lQ8BWB1 975 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pramef8Q8CE24 480 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tnfaip8l1Q8K288 186 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn1r33Q8R2E0 305 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Irf2bp1Q8R3Y8 584 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc22a6Q8VC69 545 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Nit1Q8VDK1 323 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr450Q8VF81 310 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1353Q8VGU8 309 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Acot7Q91V12 381 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Thumpd1Q99J36 350 aaKnown RBP8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Smarcd2Q99JR8 531 aaKnown RBP8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Katnbl1Q9CWJ3 299 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Zswim1Q9CWV7 455 aaKnown RBP8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mrpl45Q9D0Q7 306 aaKnown RBP8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Sdr42e1Q9D665 394 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pla2g12aQ9EPR2 192 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 AnkhQ9JHZ2 492 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tp73Q9JJP2 631 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Trav13-2A0A075B649 110 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Zfp383A0A087WRR7 490 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Chrna10B2RX82 447 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm4175D3YTW8 314 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn1r126L7N2C8 321 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Clcn7O70496 803 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rab19P35294 217 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ccr7P47774 378 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rfx2P48379 717 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 InhaQ04997 366 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Lemd1Q14C37 129 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fpr-rs6Q3SXG2 339 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 GsapQ3TCV3 858 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rnf157Q3TEL6 685 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ankub1Q3UUE9 192 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fbxo39Q5NBU5 443 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 PnocQ64387 187 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tdpoz5Q6YCH1 340 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ceacam14Q78Y72 263 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1318Q7TQW6 320 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Zfp184Q7TSH9 737 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 SetmarQ80UJ9 309 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 StgQ8BM15 349 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Sidt2Q8CIF6 832 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Klhl36Q8R124 613 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Clec2dQ91V08 207 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Klk7Q91VE3 249 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mettl13Q91YR5 698 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Otud1Q9CUB6 454 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tnfaip8l2Q9D8Y7 184 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Q9DAY5 185 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 SclyQ9JLI6 432 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 TfgQ9Z1A1 397 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Disp2Q8CIP5 1345 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ccdc88aQ5SNZ0 1873 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fam217bA2AJW5 387 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm15440D3Z3P4 90 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 1700003H04RikE9PXM2 192 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 E430018J23RikE9PZQ8 461 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr773F6VS78 311 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 1700017D01RikG5E851 209 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 P01657 111 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Aqp2P56402 271 aa8.29□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms