RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Slc22a13Q6A4L0 551 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr1349Q7TQV1 317 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Pcyt1bQ811Q9 369 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Guf1Q8C3X4 651 aaKnown RBP7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Emc1Q8C7X2 997 aaKnown RBP7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Amdhd2Q8JZV7 409 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 1700001C19RikQ8K168 210 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Slc35a3Q8R1T4 326 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Vmn1r215Q8R264 300 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Vmn1r210Q8R274 306 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Rhbdl1Q8VC82 373 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr341Q8VGK9 313 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr683Q8VGV1 319 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr575Q8VH16 318 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tssk6Q925K9 273 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Slco1a6Q99J94 670 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 NtsQ9D3P9 169 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Clvs1Q9D4C9 354 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Slc9a3r2Q9JHL1 337 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Nova1Q9JKN6 507 aaKnown RBP7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 HaspinQ9Z0R0 754 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Zscan12Q9Z1D7 501 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ppp1r17Q9Z2E4 159 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Apc2Q9Z1K7 2274 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Spta1P08032 2415 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cabin1G3X8Q1 2187 aaKnown RBP7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 BC035947B2RQY6 695 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Zfp994J3QM38 661 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Socs1O35716 212 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gpr52P0C5J4 361 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 PlaaP27612 794 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Sox18P43680 377 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 SmsP97355 366 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Rps5P97461 204 aaKnown RBP7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Igfbp5Q07079 271 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr18Q0VAX9 331 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Q3U4G0 281 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ddhd2Q80Y98 699 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ino80cQ8BHA0 191 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Zfp763Q8BIC7 588 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Slc15a3Q8BPX9 578 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Coro2aQ8C0P5 524 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Dppa4Q8CCG4 296 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 DctdQ8K2D6 178 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr340Q8VGL0 312 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cmtm6Q9CZ69 183 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Obp1aQ9D3H2 163 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 PmpcaQ9DC61 524 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Dok3Q9QZK7 444 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Exph5Q0VAV2 1960 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Pcnx3Q8VI59 2028 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Vmn2r101E9PZS9 857 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Vmn1r184E9Q2N4 314 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm11397F6V5V4 377 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr1360K9J6X0 313 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Clcn7O70496 803 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Csf2P01587 141 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 C2cd4dP0CG09 341 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Clec10aP49300 304 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 FrzbP97401 323 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Mettl7a2Q5I0W6 244 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr1359Q7TQU5 313 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr645Q7TRQ1 315 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Zfp184Q7TSH9 737 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Serpinb9fQ80UK5 377 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Slc35f4Q8BZK4 485 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Unc119bQ8C4B4 251 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Rad51ap1Q8C551 337 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 TbceQ8CIV8 524 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 P2rx2Q8K3P1 485 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tmem268Q8R239 342 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Vmn1r17Q8R2D8 303 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr1423Q8VFV0 310 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr1395Q8VGD7 317 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Spryd4Q91WK1 207 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Uckl1Q91YL3 548 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ergic3Q9CQE7 383 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Fam166aQ9D4K5 319 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Rhox2aQ9D4Y3 191 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 H2bfmQ9DAB5 224 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 C1ql3Q9ESN4 255 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Slc22a21Q9WTN6 564 aa7.94□□□□□ -1.14
Trim39-201ENSMUST00000042717 Zfhx4Q9JJN2 3550 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 CrebbpP45481 2441 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm5072A2AHM1 344 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ggta1l1A2AUQ7 319 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm9008E9PVG0 424 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Pgbd1E9Q492 415 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm19345G3UYD9 124 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr171G5E8J1 314 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm3755K7N743 167 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Gm6614M0QWR8 670 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Adrb2P18762 418 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 TP20293 436 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Fv1P70213 459 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 UbqlnlQ14DL0 610 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Mex3dQ3UE17 643 aaKnown RBP7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Prtn3Q61096 254 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hs6st2Q80UW0 612 aa7.93□□□□□ -1.14
Trim39-201ENSMUST00000042717 Clrn3Q8BHH8 226 aa7.93□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms