RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	ZDHHC20	Q5W0Z9	365 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	TMEM108	Q6UXF1	575 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	IDO2	Q6ZQW0	420 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	DNM1P46	Q6ZS02	220 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	TRMT10C	Q7L0Y3	403 aa	Known RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	PIGW	Q7Z7B1	504 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	LRRC6	Q86X45	466 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	ADGRG5	Q8IZF4	528 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	CENPL	Q8N0S6	344 aa	Predicted RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	MITD1	Q8WV92	249 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	RASSF5	Q8WWW0	418 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	EME1	Q96AY2	570 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	SPSB1	Q96BD6	273 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	SCRN2	Q96FV2	425 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	CHMP6	Q96FZ7	201 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	CAPZA3	Q96KX2	299 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	IMMP1L	Q96LU5	166 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	OPALIN	Q96PE5	141 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	VPS35	Q96QK1	796 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	SMIM14	Q96QK8	99 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	NPY6R	Q99463	290 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	NPAS2	Q99743	824 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	RBM4B	Q9BQ04	359 aa	Known RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	KCNS3	Q9BQ31	491 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	TMEM79	Q9BSE2	394 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	TIMM29	Q9BSF4	260 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	CINP	Q9BW66	212 aa	Predicted RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	RBM4	Q9BWF3	364 aa	Known RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	RBM24	Q9BX46	236 aa	Known RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	PITPNM3	Q9BZ71	974 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	TM6SF1	Q9BZW5	370 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	MED20	Q9H944	212 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	ACTR8	Q9H981	624 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	SH2D2A	Q9NP31	389 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	DIABLO	Q9NR28	239 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	SLC6A13	Q9NSD5	602 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	ZDHHC18	Q9NUE0	388 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	INTS9	Q9NV88	658 aa	Known RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	DMAC2	Q9NW81	257 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	CNOT2	Q9NZN8	540 aa	Known RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	PDP1	Q9P0J1	537 aa	Predicted RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	OR12D3	Q9UGF7	316 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	SLC24A2	Q9UI40	661 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	HAO1	Q9UJM8	370 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	PPIL1	Q9Y3C6	166 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746	CACNG2	Q9Y698	323 aa		4.59	□□□□□ -1.67
CASC19-256	ENST00000641746		A0A096LNT2	108 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746		A0A0B4J293	547 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	PVALEF	A0A1B0GWK0	134 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746		A0A1W2PQ72	361 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	MAGEA13P	A6NCF6	341 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	MAGEB17	A8MXT2	336 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746		E7ENX8	843 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	TRIM77	I1YAP6	450 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	ZNF701	M0R085	212 aa	Predicted RBP	4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	BTN3A3	O00478	584 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	DSCR3	O14972	297 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	SSX4	O60224	188 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	NDUFS7	O75251	213 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	IGHV4-39	P01824	125 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	APOA1	P02647	267 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	PRB2	P02812	416 aa	Predicted RBP	4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	GSTA1	P08263	222 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	HSMCR30	P0CW71	290 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	GABRA1	P14867	456 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	ACADS	P16219	412 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	IL7R	P16871	459 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	SRM	P19623	302 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	ITGAL	P20701	1170 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	UCP1	P25874	307 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	MTNR1A	P48039	350 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	GSS	P48637	474 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	ARHGDIA	P52565	204 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	RPL15	P61313	204 aa	Known RBP	4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	GNGT1	P63211	74 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	BST1	Q10588	318 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	HLX	Q14774	488 aa	Predicted RBP	4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	PDK3	Q15120	406 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	ZIC1	Q15915	447 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	SPANXN2	Q5MJ10	180 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	H3F3C	Q6NXT2	135 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	GPR141	Q7Z602	305 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	YRDC	Q86U90	279 aa	Known RBP	4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	FAM131B	Q86XD5	332 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	ZNF547	Q8IVP9	402 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	IFT20	Q8IY31	132 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	SLC38A6	Q8IZM9	456 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	RNF148	Q8N7C7	305 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	FBXL13	Q8NEE6	735 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	ZNF680	Q8NEM1	530 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	BBS10	Q8TAM1	723 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	ZNF596	Q8TC21	504 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	FNDC8	Q8TC99	324 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	CD300LF	Q8TDQ1	290 aa		4.58	□□□□□ -1.68
CASC19-256	ENST00000641746	OIT3	Q8WWZ8	545 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms