RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ATP6V1G2-DDX39BF2Z307 99 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 SNNO75324 88 aaPredicted RBP14.75□□□□□ -0.05
SMN2-216ENST00000638794 KITP10721 976 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 ETFAP13804 333 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 CDH2P19022 906 aaPredicted RBP14.75□□□□□ -0.05
SMN2-216ENST00000638794 ACAA2P42765 397 aaKnown RBP14.75□□□□□ -0.05
SMN2-216ENST00000638794 WDR4P57081 412 aaKnown RBP14.75□□□□□ -0.05
SMN2-216ENST00000638794 BNIP2Q12982 314 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 TMEM249Q2WGJ8 235 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 LIN52Q52LA3 116 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 C6orf52Q5T4I8 152 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 AAED1Q7RTV5 226 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 CADM2Q8N3J6 435 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 OR52P1PQ8NH57 321 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 TNFRSF13CQ96RJ3 184 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 SF3B5Q9BWJ5 86 aaKnown RBP14.75□□□□□ -0.05
SMN2-216ENST00000638794 FKRPQ9H9S5 495 aa14.75□□□□□ -0.05
SMN2-216ENST00000638794 ELOA3DA6NLF2 546 aaPredicted RBP14.74□□□□□ -0.05
SMN2-216ENST00000638794 IL6P05231 212 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 BCHEP06276 602 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 TFPTP0C1Z6 253 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 PRG2P13727 222 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 PRPS1P60891 318 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 LOXL1Q08397 574 aaPredicted RBP14.74□□□□□ -0.05
SMN2-216ENST00000638794 ELOA3BQ3SY89 546 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 CHRFAM7AQ494W8 412 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 PDCD4Q53EL6 469 aaKnown RBP14.74□□□□□ -0.05
SMN2-216ENST00000638794 HIKESHIQ53FT3 197 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 NXNQ6DKJ4 435 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 WBP2NLQ6ICG8 309 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 KLHL24Q6TFL4 600 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 POMGNT2Q8NAT1 580 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 ELOA3Q8NG57 546 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 SLC38A5Q8WUX1 472 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 FAM168AQ92567 244 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 MANSC1Q9H8J5 431 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 TPT1P8Q9HAU6 139 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 THAP1Q9NVV9 213 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 ADPRHL2Q9NX46 363 aa14.74□□□□□ -0.05
SMN2-216ENST00000638794 ZNF443Q9Y2A4 671 aaPredicted RBP14.74□□□□□ -0.05
SMN2-216ENST00000638794 TMEM120BA0PK00 339 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 A8MVM7 634 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 KLF11O14901 512 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 FRS3O43559 492 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 SLC22A3O75751 556 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 WNT11O96014 354 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 IDO1P14902 403 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 SLC25A16P16260 332 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 APOBEC3AP31941 199 aaPredicted RBP14.73□□□□□ -0.05
SMN2-216ENST00000638794 CRATP43155 626 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 P2RY4P51582 365 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 CRISP3P54108 245 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 DSTNP60981 165 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 COPZ1P61923 177 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 LGALS3BPQ08380 585 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 GTDC1Q4AE62 458 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 RPS26P11Q5JNZ5 115 aaPredicted RBP14.73□□□□□ -0.05
SMN2-216ENST00000638794 C1QTNF12Q5T7M4 302 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 RNF220Q5VTB9 566 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 PODNL1Q6PEZ8 512 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 CLIP4Q8N3C7 705 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 MGARPQ8TDB4 240 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 C10orf105Q8TEF2 133 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 AURKBQ96GD4 344 aaPredicted RBP14.73□□□□□ -0.05
SMN2-216ENST00000638794 TAPBPLQ9BX59 468 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 PIF1Q9H611 641 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 CALML5Q9NZT1 146 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 RAB21Q9UL25 225 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 MOKQ9UQ07 419 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 CHST2Q9Y4C5 530 aa14.73□□□□□ -0.05
SMN2-216ENST00000638794 LY6HO94772 140 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 ANP32DO95626 131 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 IFNA2P01563 188 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 ZCCHC18P0CG32 403 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 BMP4P12644 408 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 NCF2P19878 526 aaPredicted RBP14.72□□□□□ -0.05
SMN2-216ENST00000638794 SELENOPP49908 381 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 EFNA4P52798 201 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 VLDLRP98155 873 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 CHRNB3Q05901 458 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 LARS2Q15031 903 aaKnown RBP14.72□□□□□ -0.05
SMN2-216ENST00000638794 SLC9B1Q4ZJI4 515 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 C1orf140Q5VVS0 124 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 TMEM225Q6GV28 225 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 CROCCP2Q86T23 111 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 SERPINA11Q86U17 422 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 NANOS1Q8WY41 292 aaKnown RBP14.72□□□□□ -0.05
SMN2-216ENST00000638794 VPS33AQ96AX1 596 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 TMEM19Q96HH6 336 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 BOD1Q96IK1 185 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 MAELQ96JY0 434 aaKnown RBP14.72□□□□□ -0.05
SMN2-216ENST00000638794 ALKBH3Q96Q83 286 aaPredicted RBP14.72□□□□□ -0.05
SMN2-216ENST00000638794 REPIN1Q9BWE0 567 aaKnown RBP14.72□□□□□ -0.05
SMN2-216ENST00000638794 PRDM4Q9UKN5 801 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 PMF1-BGLAPU3KQ54 211 aa14.72□□□□□ -0.05
SMN2-216ENST00000638794 MALRD1Q5VYJ5 2156 aa14.71□□□□□ -0.05
SMN2-216ENST00000638794 IGHV1-18A0A0C4DH31 117 aa14.71□□□□□ -0.05
SMN2-216ENST00000638794 RNF212BA8MTL3 300 aa14.71□□□□□ -0.05
SMN2-216ENST00000638794 ZNF587BE7ETH6 402 aa14.71□□□□□ -0.05
SMN2-216ENST00000638794 SLCO1B7G3V0H7 640 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms