RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OR9K2Q8NGE7 335 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 KTI12Q96EK9 354 aaPredicted RBP15.6■□□□□ 0.09
PNKP-230ENST00000638016 NAA11Q9BSU3 229 aaPredicted RBP15.6■□□□□ 0.09
PNKP-230ENST00000638016 PTDSS2Q9BVG9 487 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 MALT1Q9UDY8 824 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 LAMP3Q9UQV4 416 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 CIB4A0PJX0 185 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 AQP7P3A6NL99 342 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 A8MVM7 634 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 PDLIM1O00151 329 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 CNOT4O95628 575 aaKnown RBP15.59■□□□□ 0.09
PNKP-230ENST00000638016 GPX2P18283 190 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 PRKAR1BP31321 381 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 RPS5P46782 204 aaKnown RBP15.59■□□□□ 0.09
PNKP-230ENST00000638016 SLC25A3Q00325 362 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 RUNDC3AQ59EK9 446 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 TIMM23BQ5SRD1 257 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 REEP3Q6NUK4 255 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 PTOV1Q86YD1 416 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 KDM8Q8N371 416 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 C1QTNF6Q9BXI9 259 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 ESRP2Q9H6T0 727 aaKnown RBP15.59■□□□□ 0.09
PNKP-230ENST00000638016 ASB6Q9NWX5 421 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 LEF1Q9UJU2 399 aaPredicted RBP15.59■□□□□ 0.09
PNKP-230ENST00000638016 SLC9A8Q9Y2E8 581 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 GMEB1Q9Y692 573 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 ALPK2Q86TB3 2170 aa15.59■□□□□ 0.09
PNKP-230ENST00000638016 IGKV1D-42A0A075B6H8 117 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 A0A1B0GWA3 101 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 SHISA9B4DS77 424 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 FTCDNL1E5RQL4 147 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 H7C1Q1 480 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 TPST2O60704 377 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 OPN1SWP03999 348 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 CBLP22681 906 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 PPIBP23284 216 aaKnown RBP15.58■□□□□ 0.08
PNKP-230ENST00000638016 ZNF83P51522 516 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 MAP2K6P52564 334 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 DMTNQ08495 405 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 GABRA6Q16445 453 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 ZNF672Q499Z4 452 aaPredicted RBP15.58■□□□□ 0.08
PNKP-230ENST00000638016 CGB2Q6NT52 195 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 DHRS4L2Q6PKH6 230 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 SMYD1Q8NB12 490 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 TMEM171Q8WVE6 324 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 SLC25A36Q96CQ1 311 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 TAPBPLQ9BX59 468 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 TMEM120AQ9BXJ8 343 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 GSX2Q9BZM3 304 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 TRIM2Q9C040 744 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 TMEM38AQ9H6F2 299 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 ARMC7Q9H6L4 198 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 TAS2R16Q9NYV7 291 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 NDUFAF1Q9Y375 327 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 MAGED1Q9Y5V3 778 aaPredicted RBP15.58■□□□□ 0.08
PNKP-230ENST00000638016 SLC25A15Q9Y619 301 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 CSPG4Q6UVK1 2322 aa15.58■□□□□ 0.08
PNKP-230ENST00000638016 HEATR1Q9H583 2144 aaKnown RBP15.58■□□□□ 0.08
PNKP-230ENST00000638016 TLN2Q9Y4G6 2542 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 ABCD4O14678 606 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 AHSA1O95433 338 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 DANCRP0C864 163 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 PNMTP11086 282 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 CDH2P19022 906 aaPredicted RBP15.57■□□□□ 0.08
PNKP-230ENST00000638016 CDKN1AP38936 164 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 SELENOPP49908 381 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 ZSWIM7Q19AV6 140 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 PGGHGQ32M88 737 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 LINGO2Q7L985 606 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 AAED1Q7RTV5 226 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 WDR31Q8NA23 367 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 STON2Q8WXE9 905 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 FBXW5Q969U6 566 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 TMEM45BQ96B21 275 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 MUCL1Q96DR8 90 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 C18orf12Q96KH6 178 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 ANKRD27Q96NW4 1050 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 CGREF1Q99674 301 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 NGBQ9NPG2 151 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 FGFR1OP2Q9NVK5 253 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 TMEM45AQ9NWC5 275 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 UPB1Q9UBR1 384 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 NAV3Q8IVL0 2385 aa15.57■□□□□ 0.08
PNKP-230ENST00000638016 ELOA3DA6NLF2 546 aaPredicted RBP15.56■□□□□ 0.08
PNKP-230ENST00000638016 EVPLLA8MZ36 301 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 M0R3H8 397 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 FBP2O00757 339 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 SMAD7O15105 426 aaKnown RBP15.56■□□□□ 0.08
PNKP-230ENST00000638016 ANGPT2O15123 496 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 ARHGEF9O43307 516 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 INHBBP09529 407 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 SLC6A2P23975 617 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 NFYCQ13952 458 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 ELOA3BQ3SY89 546 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 TMEM225Q6GV28 225 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 C6orf89Q6UWU4 347 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 B3GLCTQ6Y288 498 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 EPHX4Q8IUS5 362 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 DPP10Q8N608 796 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 HIPK4Q8NE63 616 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms