RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 RAB21Q9UL25 225 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 ATP23Q9Y6H3 246 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 CR1P17927 2039 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 CHD3Q12873 2000 aaKnown RBP16.17■□□□□ 0.18
CLN6-220ENST00000637450 DSPPQ9NZW4 1301 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 AQP7P3A6NL99 342 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 SLC22A3O75751 556 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 TFPTP0C1Z6 253 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 PRPS1P60891 318 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 OR7A5Q15622 319 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 PDCD4Q53EL6 469 aaKnown RBP16.16■□□□□ 0.18
CLN6-220ENST00000637450 WBP2NLQ6ICG8 309 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 HMBOX1Q6NT76 420 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 ZNF836Q6ZNA1 936 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 AAED1Q7RTV5 226 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 CROCCP2Q86T23 111 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 POMGNT2Q8NAT1 580 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 HTRA1Q92743 480 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 TNFRSF13CQ96RJ3 184 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 CALML5Q9NZT1 146 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 P2RX2Q9UBL9 471 aa16.16■□□□□ 0.18
CLN6-220ENST00000637450 A8MV72 311 aaPredicted RBP16.15■□□□□ 0.18
CLN6-220ENST00000637450 A8MVM7 634 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 WNT11O96014 354 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 ZCCHC18P0CG32 403 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 KITP10721 976 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 ETFAP13804 333 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 IDO1P14902 403 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 APOBEC3AP31941 199 aaPredicted RBP16.15■□□□□ 0.18
CLN6-220ENST00000637450 CRATP43155 626 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 P2RY4P51582 365 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 CRISP3P54108 245 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 COPZ1P61923 177 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 LOXL1Q08397 574 aaPredicted RBP16.15■□□□□ 0.18
CLN6-220ENST00000637450 BNIP2Q12982 314 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 CLIP4Q8N3C7 705 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 CADM2Q8N3J6 435 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 SLC38A5Q8WUX1 472 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 AURKBQ96GD4 344 aaPredicted RBP16.15■□□□□ 0.18
CLN6-220ENST00000637450 MAELQ96JY0 434 aaKnown RBP16.15■□□□□ 0.18
CLN6-220ENST00000637450 TPT1P8Q9HAU6 139 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 SVEP1Q4LDE5 3571 aa16.15■□□□□ 0.18
CLN6-220ENST00000637450 SLCO1B7G3V0H7 640 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 BMP4P12644 408 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 SLC25A16P16260 332 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 CHRNB3Q05901 458 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 ZSWIM7Q19AV6 140 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 TMEM249Q2WGJ8 235 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 RNF220Q5VTB9 566 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 NXNQ6DKJ4 435 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 TMEM225Q6GV28 225 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 PODNL1Q6PEZ8 512 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 GPAT4Q86UL3 456 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 ZNF525Q8N782 197 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 TAPBPLQ9BX59 468 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 ZIM2Q9NZV7 527 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 ZNF443Q9Y2A4 671 aaPredicted RBP16.14■□□□□ 0.17
CLN6-220ENST00000637450 CHST2Q9Y4C5 530 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 PMF1-BGLAPU3KQ54 211 aa16.14■□□□□ 0.17
CLN6-220ENST00000637450 A0A0G2JPF8 293 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 TMEM120BA0PK00 339 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 HNRNPCL2B2RXH8 293 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 HNRNPCL3B7ZW38 293 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 ATP6V1G2-DDX39BF2Z307 99 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 HNRNPCL1O60812 293 aaKnown RBP16.13■□□□□ 0.17
CLN6-220ENST00000637450 NPIPB7O75200 414 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 VAMP5O95183 116 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 ANP32DO95626 131 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 IFNA2P01563 188 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 BCHEP06276 602 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 HNRNPCL4P0DMR1 293 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 PRG2P13727 222 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 CDH2P19022 906 aaPredicted RBP16.13■□□□□ 0.17
CLN6-220ENST00000637450 EFNA4P52798 201 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 DSTNP60981 165 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 VLDLRP98155 873 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 LARS2Q15031 903 aaKnown RBP16.13■□□□□ 0.17
CLN6-220ENST00000637450 CHRFAM7AQ494W8 412 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 SLC9B1Q4ZJI4 515 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 HIKESHIQ53FT3 197 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 C6orf52Q5T4I8 152 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 C1orf140Q5VVS0 124 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 ATG16L1Q676U5 607 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 MSANTD1Q6ZTZ1 278 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 CREB3L2Q70SY1 520 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 ABHD12BQ7Z5M8 362 aaPredicted RBP16.13■□□□□ 0.17
CLN6-220ENST00000637450 FAM168AQ92567 244 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 RMND5AQ9H871 391 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 OBP2BQ9NPH6 170 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 SDR39U1Q9NRG7 319 aaPredicted RBP16.13■□□□□ 0.17
CLN6-220ENST00000637450 TMEM45AQ9NWC5 275 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 ADPRHL2Q9NX46 363 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 THUMPD1Q9NXG2 353 aaKnown RBP16.13■□□□□ 0.17
CLN6-220ENST00000637450 ZNF232Q9UNY5 417 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 MOKQ9UQ07 419 aa16.13■□□□□ 0.17
CLN6-220ENST00000637450 A0A096LPI6 279 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 KLF11O14901 512 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 FRS3O43559 492 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 F12P00748 615 aaPredicted RBP16.12■□□□□ 0.17
CLN6-220ENST00000637450 SLC18A1P54219 525 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms