RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 CD8BP10966 210 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 GRNP28799 593 aaKnown RBP13.8□□□□□ -0.2
CLN6-211ENST00000635754 H3F3AP84243 136 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 FBXL19-AS1Q494R0 122 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 OTUD3Q5T2D3 398 aaPredicted RBP13.8□□□□□ -0.2
CLN6-211ENST00000635754 FAM69AQ5T7M9 428 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 TTC33Q6PID6 262 aaPredicted RBP13.8□□□□□ -0.2
CLN6-211ENST00000635754 GDF7Q7Z4P5 450 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 BTLAQ7Z6A9 289 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 LUZP2Q86TE4 346 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 TSPYL5Q86VY4 417 aaPredicted RBP13.8□□□□□ -0.2
CLN6-211ENST00000635754 TUSC5Q8IXB3 177 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 SLC25A36Q96CQ1 311 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 PRRC1Q96M27 445 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 PTDSS2Q9BVG9 487 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 AMBRA1Q9C0C7 1298 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 MUC13Q9H3R2 512 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 BCO1Q9HAY6 547 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 EMC3Q9P0I2 261 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 ZNF724A8MTY0 619 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 C19orf84I3L1E1 186 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 PDE5AO76074 875 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 AKR7A3O95154 331 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 LYPD3O95274 346 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 THY1P04216 161 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 PTNP21246 168 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 PIN1Q13526 163 aaPredicted RBP13.79□□□□□ -0.2
CLN6-211ENST00000635754 PDK3Q15120 406 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 LINC00114Q6XXX2 140 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 P3H2Q8IVL5 708 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 CCDC103Q8IW40 242 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 THTPAQ9BU02 230 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 C6orf203Q9P0P8 240 aaPredicted RBP13.79□□□□□ -0.2
CLN6-211ENST00000635754 ACTR3BQ9P1U1 418 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 RIMS3Q9UJD0 308 aa13.79□□□□□ -0.2
CLN6-211ENST00000635754 FOXD3Q9UJU5 478 aaPredicted RBP13.79□□□□□ -0.2
CLN6-211ENST00000635754 IGKV3D-15A0A087WSY6 115 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 AQP7P3A6NL99 342 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 ZNF716A6NP11 495 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 A8MXE2 369 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 ZNF814B7Z6K7 855 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 FTCDNL1E5RQL4 147 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 GPR171O14626 319 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 CGAP01215 116 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 THRBP10828 461 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 UQCRC1P31930 480 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 ST3GAL3Q11203 375 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 BNIP1Q12981 228 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 MFSD13AQ14CX5 517 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 SP5Q6BEB4 398 aaPredicted RBP13.78□□□□□ -0.2
CLN6-211ENST00000635754 TMEM225Q6GV28 225 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 WDR88Q6ZMY6 472 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 STK32CQ86UX6 486 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 CYP4Z1Q86W10 505 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 C10orf53Q8N6V4 93 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 FAM86B1Q8N7N1 296 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 TMEM99Q8N816 258 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 OR6S1Q8NH40 331 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 RNASE6Q93091 150 aaKnown RBP13.78□□□□□ -0.2
CLN6-211ENST00000635754 TAAR8Q969N4 342 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 ZNF300Q96RE9 604 aaPredicted RBP13.78□□□□□ -0.2
CLN6-211ENST00000635754 BTBD10Q9BSF8 475 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 RBM24Q9BX46 236 aaKnown RBP13.78□□□□□ -0.2
CLN6-211ENST00000635754 SLC19A3Q9BZV2 496 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 OPN3Q9H1Y3 402 aaPredicted RBP13.78□□□□□ -0.2
CLN6-211ENST00000635754 C12orf49Q9H741 205 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 NPDC1Q9NQX5 325 aaPredicted RBP13.78□□□□□ -0.2
CLN6-211ENST00000635754 PLSCR4Q9NRQ2 329 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 ING1Q9UK53 422 aaPredicted RBP13.78□□□□□ -0.2
CLN6-211ENST00000635754 A4GNTQ9UNA3 340 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 V9GYQ6 96 aa13.78□□□□□ -0.2
CLN6-211ENST00000635754 FLNBO75369 2602 aaKnown RBP13.77□□□□□ -0.2
CLN6-211ENST00000635754 RAMP1O60894 148 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 FZD7O75084 574 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 ATP5HO75947 161 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 STAMBPO95630 424 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 COL8A1P27658 744 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 RBM34P42696 430 aaKnown RBP13.77□□□□□ -0.21
CLN6-211ENST00000635754 YAP1P46937 504 aaKnown RBP13.77□□□□□ -0.21
CLN6-211ENST00000635754 RASSF2P50749 326 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 SLC16A1P53985 500 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 TRIM25Q14258 630 aaKnown RBP13.77□□□□□ -0.21
CLN6-211ENST00000635754 MTX3Q5HYI7 312 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 LCE2DQ5TA82 110 aaPredicted RBP13.77□□□□□ -0.21
CLN6-211ENST00000635754 GALNT5Q7Z7M9 940 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 DHFR2Q86XF0 187 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 OFCC1Q8IZS5 231 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 CCDC124Q96CT7 223 aaKnown RBP13.77□□□□□ -0.21
CLN6-211ENST00000635754 SLC7A6OSQ96CW6 309 aaPredicted RBP13.77□□□□□ -0.21
CLN6-211ENST00000635754 PYURFQ96I23 114 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 PRSS27Q9BQR3 290 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 ZNF426Q9BUY5 554 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 FNDC11Q9BVV2 318 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 SF3B5Q9BWJ5 86 aaKnown RBP13.77□□□□□ -0.21
CLN6-211ENST00000635754 CORINQ9Y5Q5 1042 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 ENPP4Q9Y6X5 453 aa13.77□□□□□ -0.21
CLN6-211ENST00000635754 J3KTA2 159 aa13.76□□□□□ -0.21
CLN6-211ENST00000635754 KPNA4O00629 521 aaPredicted RBP13.76□□□□□ -0.21
CLN6-211ENST00000635754 VAMP5O95183 116 aa13.76□□□□□ -0.21
CLN6-211ENST00000635754 MT-ATP6P00846 226 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms