RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 TUBA3EQ6PEY2 450 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 LINC00114Q6XXX2 140 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 WDR88Q6ZMY6 472 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 MEPCEQ7L2J0 689 aaKnown RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 OAFQ86UD1 273 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 CADM2Q8N3J6 435 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SLC15A4Q8N697 577 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SLC2A12Q8TD20 617 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 NAT6Q93015 286 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 EFHD2Q96C19 240 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SGTBQ96EQ0 304 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 LRFN5Q96NI6 719 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 ZNF426Q9BUY5 554 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 IFT27Q9BW83 186 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 JAM3Q9BX67 310 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 GON7Q9BXV9 100 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SLC19A3Q9BZV2 496 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 OR8D2Q9GZM6 311 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SLIRPQ9GZT3 109 aaKnown RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 PRMT8Q9NR22 394 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SLC35D1Q9NTN3 355 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 TAS2R16Q9NYV7 291 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 FLRT3Q9NZU0 649 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 DHCR7Q9UBM7 475 aaKnown RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 CLEC2DQ9UHP7 191 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 PILRBQ9UKJ0 227 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 STUB1Q9UNE7 303 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SIGLEC7Q9Y286 467 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 NPFFR2Q9Y5X5 522 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 CACNA1AO00555 2505 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 C2orf92A0A1B0GVN3 265 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 OR2W5A6NFC9 320 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 RIIAD1A6NNX1 92 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 A8MUA0 341 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 BHLHE40O14503 412 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 DIRAS3O95661 229 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 CLPSP04118 112 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 IGKV3-11P04433 115 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 TBXA2RP21731 343 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 ETV5P41161 510 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SLC6A8P48029 635 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 LUMP51884 338 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 AGFG1P52594 562 aaKnown RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SRSF5Q13243 272 aaKnown RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 NSDHLQ15738 373 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 PCGF3Q3KNV8 242 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 ZNF528Q3MIS6 628 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 WBP2NLQ6ICG8 309 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 RHBDD2Q6NTF9 364 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SLC29A4Q7RTT9 530 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 ARHGAP22Q7Z5H3 698 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 KLHL36Q8N4N3 616 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 OR4D9Q8NGE8 314 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SAP25Q8TEE9 199 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 UFD1Q92890 307 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 RAB24Q969Q5 203 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 INTS12Q96CB8 462 aaKnown RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 NDEL1Q9GZM8 345 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 ZBTB20Q9HC78 741 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-230ENST00000634433 ATP13A2Q9NQ11 1180 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 AKIP1Q9NQ31 210 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 CMC2Q9NRP2 79 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 INPP5EQ9NRR6 644 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 NDUFB11Q9NX14 153 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 TNFRSF10DQ9UBN6 386 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 ICAM5Q9UMF0 924 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 PEX16Q9Y5Y5 336 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 SPTBP11277 2137 aa6.55□□□□□ -1.36
BRCA1-230ENST00000634433 A0A087WUJ7 227 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 MED19A0JLT2 244 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-230ENST00000634433 CPED1A4D0V7 1026 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 PMS2P1A4D2B8 440 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 METTL15A6NJ78 407 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 SLC22A31A6NKX4 558 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 PRR23D1E9PI22 279 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-230ENST00000634433 F5H0A9 414 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-230ENST00000634433 ERVH48-1M5A8F1 160 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 KPNA4O00629 521 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-230ENST00000634433 TO15178 435 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 UTS2O95399 124 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 NTN1O95631 604 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 DDAH2O95865 285 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 PLGP00747 810 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-230ENST00000634433 PRR23D2P0DMB1 279 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-230ENST00000634433 UBL4AP11441 157 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 IL12BP29460 328 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 HTR2BP41595 481 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 CAPZA2P47755 286 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 GBX2P52951 348 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-230ENST00000634433 GAS1P54826 345 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 MLLT10P55197 1068 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 CRYZQ08257 329 aaKnown RBP6.54□□□□□ -1.36
BRCA1-230ENST00000634433 TPBGQ13641 420 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 SSX1Q16384 188 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 TSSK4Q6SA08 328 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 TMPRSS11AQ6ZMR5 421 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 KANSL1Q7Z3B3 1105 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 FAM71CQ8NEG0 241 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 OR4C3Q8NH37 302 aa6.54□□□□□ -1.36
BRCA1-230ENST00000634433 OR52N1Q8NH53 320 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms