RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 ART5Q96L15 291 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 CNTNAP3BQ96NU0 1288 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 OR7D2Q96RA2 312 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 PRSS27Q9BQR3 290 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 RIOK2Q9BVS4 552 aaKnown RBP3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 SORBS1Q9BX66 1292 aaKnown RBP3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 CNTNAP3Q9BZ76 1288 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 MFFQ9GZY8 342 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 C1orf198Q9H425 327 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 LHX9Q9NQ69 397 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 MLXQ9UH92 298 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 SLC25A13Q9UJS0 675 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 SLC35A3Q9Y2D2 325 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 CARHSP1Q9Y2V2 147 aaKnown RBP3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 AK6Q9Y3D8 172 aaKnown RBP3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 MYO7AQ13402 2215 aa3.84□□□□□ -1.79
PTP4A1-205ENST00000626021 NUP210LQ5VU65 1888 aa3.84□□□□□ -1.8
PTP4A1-205ENST00000626021 NUMA1Q14980 2115 aa3.84□□□□□ -1.8
PTP4A1-205ENST00000626021 TBC1D3EA0A087X179 549 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TMEM82A0PJX8 343 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TMEM218A2RU14 115 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ANTXRLA6NF34 631 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LRRC72A6NJI9 287 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 IFITM5A6NNB3 132 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 C5orf67F2Z3F1 127 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 H7C417 338 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PYCARD-AS1I3L0S3 204 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LEFTY2O00292 366 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CDC42EP2O14613 210 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 IMPA2O14732 288 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 FGF16O43320 207 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TMPRSS11DO60235 418 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 FMO6PO60774 539 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 SNRNP200O75643 2136 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 RBBP9O75884 186 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 KDM4BO94953 1096 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PMS2P2O95744 297 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 S100A8P05109 93 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 HMGN2P05204 90 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 FCER2P06734 321 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 THBS1P07996 1170 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 HNRNPA1P09651 372 aaKnown RBP eCLIP3.83□□□□□ -1.81e-6■■■■□ 20.2
PTP4A1-205ENST00000626021 VSIG10L2P0DP72 767 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 HLA-GP17693 338 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 SRMP19623 302 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ANXA7P20073 488 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CNR1P21554 472 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TEAD1P28347 426 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CD70P32970 193 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ACVR1BP36896 505 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 RPL35P42766 123 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 GPR4P46093 362 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 GDI2P50395 445 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 RGS8P57771 180 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 SIRPAP78324 504 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PRR5P85299 388 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 DEFA5Q01523 94 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 MEF2AQ02078 507 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TGM3Q08188 693 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LGALS3BPQ08380 585 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CBFBQ13951 182 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZNF77Q15935 545 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 RNASE12Q5GAN4 147 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TXNDC8Q6A555 127 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 OR4C11Q6IEV9 310 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 MRM1Q6IN84 353 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PWWP2BQ6NUJ5 590 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LPCAT3Q6P1A2 487 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 C3orf33Q6P1S2 294 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PSRC1Q6PGN9 363 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TSSK4Q6SA08 328 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 NHLRC1Q6VVB1 395 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ESPNLQ6ZVH7 1005 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 Q6ZVL8 140 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TMCO2Q7Z6W1 182 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 C17orf64Q86WR6 236 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 VRK2Q86Y07 508 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 GLB1L2Q8IW92 636 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CFAP206Q8IYR0 622 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CDK20Q8IZL9 346 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LINC00528Q8N1L1 170 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LILRA3Q8N6C8 439 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 POMGNT2Q8NAT1 580 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 KREMEN2Q8NCW0 462 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 BPIFCQ8NFQ6 507 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 OR6N1Q8NGY5 312 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 GLYATL2Q8WU03 294 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 RBM18Q96H35 190 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 NARS2Q96I59 477 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZNF514Q96K75 400 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 OR1F2PQ96R84 312 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 F2RL3Q96RI0 385 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 BBS4Q96RK4 519 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZDHHC5Q9C0B5 715 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LINC00597Q9H2U6 94 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZDHHC6Q9H6R6 413 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 MTHFD2LQ9H903 347 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 SIDT1Q9NXL6 827 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ANKRD10Q9NXR5 420 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TAS2R3Q9NYW6 316 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms